Difference between revisions of "TSS:Hg 103053.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=-5 | |distance_to_tss=-5 | ||
|end=134164570 | |end=134164570 | ||
| + | |end_of_center_position=134164569 | ||
|entrez_id=100151684 | |entrez_id=100151684 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=RNU6ATAC1 | + | |gene_alias=RNU6ATAC1 |
|gene_description="RNA, U6atac small nuclear (U12-dependent splicing)" | |gene_description="RNA, U6atac small nuclear (U12-dependent splicing)" | ||
|gene_id=100151684 | |gene_id=100151684 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=134164567 | |start=134164567 | ||
| + | |start_of_center_position=134164568 | ||
|strand=- | |strand=- | ||
|tata_box="-26(CCTTAAATAAAG,+,0.00)" | |tata_box="-26(CCTTAAATAAAG,+,0.00)" | ||
Revision as of 15:08, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 134164568 |
|---|---|
| End of the center position in the TSS region: | 134164569 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000408749.1 NR_023344 uc010nap.2 U62823 |
|---|---|
| Distance: | 4 |
| Num_trans: | 4 |
| All_trans: | ENST00000408749.1:4 NR_023344:4 uc010nap.2:4 U62823:4 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NR_023344 |
| Entrez ID: | 100151684 |
| Nearest Unigene: | Hs.545589 |
| Nearest Refseq: | NR_023344 |
| Nearest Ensembl: | ENSG00000221676 |
| Gene Name: | "RNA, U6atac small nuclear (U12-dependent splicing)" |
| Gene Alias: | RNU6ATAC1 |
| Gene Description: | "RNA, U6atac small nuclear (U12-dependent splicing)" |
| Gene Type: | snRNA |
| CpG%: | 0.05 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-26(CCTTAAATAAAG,+,0.00)" |
