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Difference between revisions of "TSS:Hg 103095.1"

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Line 8: Line 8:
 
|distance_to_tss=610
 
|distance_to_tss=610
 
|end=135501263
 
|end=135501263
 +
|end_of_center_position=135501242
 
|entrez_id=51116
 
|entrez_id=51116
 
|gc_percent=0.721393
 
|gc_percent=0.721393
|gene_alias=CGI-91|MRP-S2|S2mt
+
|gene_alias=CGI-91
 
|gene_description=mitochondrial ribosomal protein S2
 
|gene_description=mitochondrial ribosomal protein S2
 
|gene_id=138162
 
|gene_id=138162
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=135501219
 
|start=135501219
 +
|start_of_center_position=135501241
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000371791.5 uc064wyq.1 BC021261
 
|transcript_name=ENST00000371791.5 uc064wyq.1 BC021261

Revision as of 15:23, 11 May 2019

Basic information about the TSS


TSS ID:hg_103095.1
Species:human
Chr:chr9
TSS Classification:yes
Start:135501219
End:135501263
Strand:-
TSS Score:1
Start of the center position in the TSS region:135501241
End of the center position in the TSS region:135501242



Gene and protein annotation


Transcript_name:ENST00000371791.5 uc064wyq.1 BC021261
Distance:-471
GeneID:138162
HGNC/MGI_ID:HGNC:28435
UniProt_ID:Q5BN46
Gene_name:chromosome 9 open reading frame 116
Gene_symbol:C9orf116
Gene_synonyms:MGC29761 PIERCE1 RbEST47
Gene_source:HGNC:28435



Transcript annotation


Transcript_name:ENST00000371791.5 uc064wyq.1 BC021261
Distance:-471
Num_trans:3
All_trans:ENST00000371791.5:-471 uc064wyq.1:-471 BC021261:-471



TATA-Box annotation


Distance to TSS:610
Nearest PromoterID:NR_051968
Entrez ID:51116
Nearest Unigene:Hs.382044
Nearest Refseq:NM_016034
Nearest Ensembl:ENSG00000122140
Gene Name:chromosome 9 open reading frame 116
Gene Alias:CGI-91
Gene Description:mitochondrial ribosomal protein S2
Gene Type:protein-coding
CpG%:0.11
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):