Personal tools

Difference between revisions of "TSS:Hg 103096.1"

From referenceTSS

Jump to: navigation, search
Line 8: Line 8:
 
|distance_to_tss=1120
 
|distance_to_tss=1120
 
|end=135501760
 
|end=135501760
 +
|end_of_center_position=135501751
 
|entrez_id=51116
 
|entrez_id=51116
 
|gc_percent=0.641791
 
|gc_percent=0.641791
|gene_alias=CGI-91|MRP-S2|S2mt
+
|gene_alias=CGI-91
 
|gene_description=mitochondrial ribosomal protein S2
 
|gene_description=mitochondrial ribosomal protein S2
 
|gene_id=138162
 
|gene_id=138162
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=135501741
 
|start=135501741
 +
|start_of_center_position=135501750
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000371791.5 uc064wyq.1 BC021261
 
|transcript_name=ENST00000371791.5 uc064wyq.1 BC021261

Revision as of 15:24, 11 May 2019

Basic information about the TSS


TSS ID:hg_103096.1
Species:human
Chr:chr9
TSS Classification:yes
Start:135501741
End:135501760
Strand:-
TSS Score:1
Start of the center position in the TSS region:135501750
End of the center position in the TSS region:135501751



Gene and protein annotation


Transcript_name:ENST00000371791.5 uc064wyq.1 BC021261
Distance:8
GeneID:138162
HGNC/MGI_ID:HGNC:28435
UniProt_ID:Q5BN46
Gene_name:chromosome 9 open reading frame 116
Gene_symbol:C9orf116
Gene_synonyms:MGC29761 PIERCE1 RbEST47
Gene_source:HGNC:28435



Transcript annotation


Transcript_name:ENST00000371791.5 uc064wyq.1 BC021261
Distance:8
Num_trans:3
All_trans:ENST00000371791.5:8 uc064wyq.1:8 BC021261:8



TATA-Box annotation


Distance to TSS:1120
Nearest PromoterID:NR_051968
Entrez ID:51116
Nearest Unigene:Hs.382044
Nearest Refseq:NM_016034
Nearest Ensembl:ENSG00000122140
Gene Name:chromosome 9 open reading frame 116
Gene Alias:CGI-91
Gene Description:mitochondrial ribosomal protein S2
Gene Type:protein-coding
CpG%:0.045
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):