Difference between revisions of "TSS:Hg 103100.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=280 | |distance_to_tss=280 | ||
|end=135699265 | |end=135699265 | ||
| + | |end_of_center_position=135699249 | ||
|entrez_id=402381 | |entrez_id=402381 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=C9orf157 | + | |gene_alias=C9orf157 |
|gene_description=spermatogenesis and oogenesis specific basic helix-loop-helix 1 | |gene_description=spermatogenesis and oogenesis specific basic helix-loop-helix 1 | ||
|gene_name=SOHLH1 | |gene_name=SOHLH1 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=135699231 | |start=135699231 | ||
| + | |start_of_center_position=135699248 | ||
|strand=- | |strand=- | ||
|tata_box="75(CCTTTTCTGGGG,+,0.00)" | |tata_box="75(CCTTTTCTGGGG,+,0.00)" | ||
Revision as of 15:27, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 135699248 |
|---|---|
| End of the center position in the TSS region: | 135699249 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ900742 |
|---|---|
| Distance: | -203 |
| Num_trans: | 10 |
| All_trans: | KJ900742:-203 AY884306:-208 ENST00000298466.9:-263 ENST00000425225.1:-263 NM_001101677:-263 NM_001012415:-263 uc004cgl.4:-263 uc010nbe.4:-263 AY902244:-263 BC031861:-263 |
TATA-Box annotation
| Distance to TSS: | 280 |
|---|---|
| Nearest PromoterID: | NM_001012415 |
| Entrez ID: | 402381 |
| Nearest Unigene: | Hs.120464 |
| Nearest Refseq: | NM_001012415 |
| Nearest Ensembl: | ENSG00000165643 |
| Gene Name: | SOHLH1 |
| Gene Alias: | C9orf157 |
| Gene Description: | spermatogenesis and oogenesis specific basic helix-loop-helix 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "75(CCTTTTCTGGGG,+,0.00)" |
