Difference between revisions of "TSS:Hg 103206.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=693 | |distance_to_tss=693 | ||
|end=136757588 | |end=136757588 | ||
| + | |end_of_center_position=136757586 | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
|gene_id=138307 | |gene_id=138307 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=136757583 | |start=136757583 | ||
| + | |start_of_center_position=136757585 | ||
|strand=- | |strand=- | ||
|tata_box="-80(GGTTTTTAAAAG,-,0.00),-78(TTTTTAAAAGTC,+,0.00)" | |tata_box="-80(GGTTTTTAAAAG,-,0.00),-78(TTTTTAAAAGTC,+,0.00)" | ||
Revision as of 15:47, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 136757585 |
|---|---|
| End of the center position in the TSS region: | 136757586 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000482893.1 uc064xdt.1 AK090647 |
|---|---|
| Distance: | 46 |
| Num_trans: | 8 |
| All_trans: | ENST00000482893.1:46 uc064xdt.1:46 AK090647:46 ENST00000479767.1:127 uc064xds.1:127 BC024235:127 HQ258567:-344 KJ895524:-344 |
TATA-Box annotation
| Distance to TSS: | 693 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-80(GGTTTTTAAAAG,-,0.00),-78(TTTTTAAAAGTC,+,0.00)" |
