Difference between revisions of "TSS:Hg 10003.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=55 |entrez_id=23463 |gc_percent=0.791045 |gene_alias=HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT |gene_description=isoprenylcysteine c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MST098= | ||
| + | |MSTP098= | ||
| + | |PCCMT= | ||
| + | |PCMT= | ||
| + | |PPMT= | ||
| + | |all_trans=ENST00000343813.9:0 uc001amk.4:0 BC028168:0 AB590586:1 AF064084:-3 KJ893378:4 KJ905434:4 CR541671:5 CR541711:5 AK092890:-20 ENST00000489498.5:-29 ENST00000474756.1:-29 uc057btt.1:-29 uc057btu.1:-29 BC017037:-29 NM_012405:-41 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance=0 | ||
|distance_to_tss=55 | |distance_to_tss=55 | ||
| + | |end=6235943 | ||
|entrez_id=23463 | |entrez_id=23463 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT | |gene_alias=HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT | ||
|gene_description=isoprenylcysteine carboxyl methyltransferase | |gene_description=isoprenylcysteine carboxyl methyltransferase | ||
| − | |gene_name=ICMT | + | |gene_id=23463 |
| + | |gene_name=isoprenylcysteine carboxyl methyltransferase | ||
| + | |gene_source=HGNC:5350 | ||
| + | |gene_symbol=ICMT | ||
| + | |gene_synonyms=HSTE14 PCCMT PPMT | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5350 | ||
|nearest_ensembl=ENSG00000116237 | |nearest_ensembl=ENSG00000116237 | ||
|nearest_promoter_id=NM_012405 | |nearest_promoter_id=NM_012405 | ||
|nearest_refseq=NM_012405 | |nearest_refseq=NM_012405 | ||
|nearest_unigene=Hs.515688 | |nearest_unigene=Hs.515688 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=6235915 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000343813.9 uc001amk.4 BC028168 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10003.1 | |tss_id=hg_10003.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R4F6 O60725 | ||
}} | }} | ||
Revision as of 16:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000343813.9 uc001amk.4 BC028168 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000343813.9:0 uc001amk.4:0 BC028168:0 AB590586:1 AF064084:-3 KJ893378:4 KJ905434:4 CR541671:5 CR541711:5 AK092890:-20 ENST00000489498.5:-29 ENST00000474756.1:-29 uc057btt.1:-29 uc057btu.1:-29 BC017037:-29 NM_012405:-41 |
TATA-Box annotation
| Distance to TSS: | 55 |
|---|---|
| Nearest PromoterID: | NM_012405 |
| Entrez ID: | 23463 |
| Nearest Unigene: | Hs.515688 |
| Nearest Refseq: | NM_012405 |
| Nearest Ensembl: | ENSG00000116237 |
| Gene Name: | isoprenylcysteine carboxyl methyltransferase |
| Gene Alias: | HSTE14 |
| Gene Description: | isoprenylcysteine carboxyl methyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
