Difference between revisions of "TSS:Hg 103642.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=60 | |distance_to_tss=60 | ||
|end=5446621 | |end=5446621 | ||
| + | |end_of_center_position=5446612 | ||
|entrez_id=10276 | |entrez_id=10276 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=ARHGEF8 | + | |gene_alias=ARHGEF8 |
|gene_description=neuroepithelial cell transforming 1 | |gene_description=neuroepithelial cell transforming 1 | ||
|gene_id=10276 | |gene_id=10276 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=5446601 | |start=5446601 | ||
| + | |start_of_center_position=5446611 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000486354.1 ENST00000449083.5 ENST00000380359.3 uc057rjj.1 uc057rjk.1 uc001iib.5 AK315566 AK294244 AK304028 AK024919 AJ010046 BC010285 | |transcript_name=ENST00000486354.1 ENST00000449083.5 ENST00000380359.3 uc057rjj.1 uc057rjk.1 uc001iib.5 AK315566 AK294244 AK304028 AK024919 AJ010046 BC010285 | ||
Revision as of 23:08, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5446611 |
|---|---|
| End of the center position in the TSS region: | 5446612 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000486354.1 ENST00000449083.5 ENST00000380359.3 uc057rjj.1 uc057rjk.1 uc001iib.5 AK315566 AK294244 AK304028 AK024919 AJ010046 BC010285 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000486354.1:0 ENST00000449083.5:0 ENST00000380359.3:0 uc057rjj.1:0 uc057rjk.1:0 uc001iib.5:0 AK315566:0 AK294244:0 AK304028:0 AK024919:0 AJ010046:0 BC010285:0 NM_005863:-51 NR_073040:-51 CU679671:143 KJ898188:143 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NR_073040 |
| Entrez ID: | 10276 |
| Nearest Unigene: | Hs.25155 |
| Nearest Refseq: | NM_005863 |
| Nearest Ensembl: | ENSG00000173848 |
| Gene Name: | neuroepithelial cell transforming 1 |
| Gene Alias: | ARHGEF8 |
| Gene Description: | neuroepithelial cell transforming 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
