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Difference between revisions of "TSS:Hg 10388.1"

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Line 10: Line 10:
 
|distance_to_tss=45
 
|distance_to_tss=45
 
|end=12617701
 
|end=12617701
 +
|end_of_center_position=12617686
 
|entrez_id=9249
 
|entrez_id=9249
 
|gc_percent=0.522388
 
|gc_percent=0.522388
|gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1
+
|gene_alias=DD83.1
 
|gene_description=dehydrogenase/reductase 3
 
|gene_description=dehydrogenase/reductase 3
 
|gene_id=9249
 
|gene_id=9249
Line 29: Line 30:
 
|species=human
 
|species=human
 
|start=12617670
 
|start=12617670
 +
|start_of_center_position=12617685
 
|strand=-
 
|strand=-
 
|transcript_name=AK312961 AK309282
 
|transcript_name=AK312961 AK309282

Revision as of 17:49, 10 May 2019

Basic information about the TSS


TSS ID:hg_10388.1
Species:human
Chr:chr1
TSS Classification:yes
Start:12617670
End:12617701
Strand:-
TSS Score:1
Start of the center position in the TSS region:12617685
End of the center position in the TSS region:12617686



Gene and protein annotation


Transcript_name:AK312961 AK309282
Distance:0
GeneID:9249
HGNC/MGI_ID:HGNC:17693
UniProt_ID:
Gene_name:dehydrogenase/reductase (SDR family) member 3
Gene_symbol:DHRS3
Gene_synonyms:RDH17 Rsdr1 SDR1 SDR16C1 retSDR1
Gene_source:HGNC:17693



Transcript annotation


Transcript_name:AK312961 AK309282
Distance:0
Num_trans:16
All_trans:AK312961:0 AK309282:0 ENST00000616661.4:-30 NM_004753:-30 uc031tpa.2:-30 BX648476:-30 AY358093:33 AK310202:38 BC002730:208 AK222593:269 AF061741:270 CU678154:322 KJ897985:323 DQ893006:323 DQ896252:323 DQ426869:328



TATA-Box annotation


Distance to TSS:45
Nearest PromoterID:NM_004753
Entrez ID:9249
Nearest Unigene:Hs.289347
Nearest Refseq:NM_004753
Nearest Ensembl:ENSG00000162496
Gene Name:dehydrogenase/reductase (SDR family) member 3
Gene Alias:DD83.1
Gene Description:dehydrogenase/reductase 3
Gene Type:protein-coding
CpG%:0.05
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):