Difference between revisions of "TSS:Hg 103936.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-141 | |distance_to_tss=-141 | ||
|end=13099926 | |end=13099926 | ||
| + | |end_of_center_position=13099914 | ||
|entrez_id=83643 | |entrez_id=83643 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=13099901 | |start=13099901 | ||
| + | |start_of_center_position=13099913 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_021980 NM_001008213 NM_001008212 NM_001008211 | |transcript_name=NM_021980 NM_001008213 NM_001008212 NM_001008211 | ||
Revision as of 23:53, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 13099913 |
|---|---|
| End of the center position in the TSS region: | 13099914 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_021980 NM_001008213 NM_001008212 NM_001008211 |
|---|---|
| Distance: | 156 |
| Num_trans: | 31 |
| All_trans: | NM_021980:156 NM_001008213:156 NM_001008212:156 NM_001008211:156 AK316171:210 AK303715:232 ENST00000487935.1:233 uc057rth.1:233 ENST00000482140.5:237 uc057rti.1:237 ENST00000378757.6:243 uc001ilx.2:243 BC013876:243 ENST00000430081.5:247 ENST00000378752.7:247 ENST00000378748.7:247 uc057rtj.1:247 uc001ilw.2:247 uc001ily.2:247 BC032762:247 AF061034:284 ENST00000378764.6:-299 ENST00000378747.7:299 uc057rtg.1:-299 uc001ilv.2:299 AF420371:299 AF420372:299 AF420373:299 ENST00000263036.9:-453 uc057rtf.1:-453 AK055403:-453 |
TATA-Box annotation
| Distance to TSS: | -141 |
|---|---|
| Nearest PromoterID: | NM_001282658 |
| Entrez ID: | 83643 |
| Nearest Unigene: | Hs.498720 |
| Nearest Refseq: | NM_031455 |
| Nearest Ensembl: | ENSG00000151468 |
| Gene Name: | optineurin |
| Gene Alias: | - |
| Gene Description: | coiled-coil domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
