Difference between revisions of "TSS:Hg 104066.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance_to_tss=-4778 | |distance_to_tss=-4778 | ||
|end=17234788 | |end=17234788 | ||
| + | |end_of_center_position=17234764 | ||
|entrez_id=100507347 | |entrez_id=100507347 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=17234738 | |start=17234738 | ||
| + | |start_of_center_position=17234763 | ||
|strand=+ | |strand=+ | ||
|tata_box="40(TGCCCTTAAAGG,-,0.00),41(GCCCTTAAAGGA,-,0.00)" | |tata_box="40(TGCCCTTAAAGG,-,0.00),41(GCCCTTAAAGGA,-,0.00)" | ||
Revision as of 00:28, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17234763 |
|---|---|
| End of the center position in the TSS region: | 17234764 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -4778 |
|---|---|
| Nearest PromoterID: | NR_108061 |
| Entrez ID: | 100507347 |
| Nearest Unigene: | Hs.740502 |
| Nearest Refseq: | NR_108060 |
| Nearest Ensembl: | ENSG00000229124 |
| Gene Name: | VIM-AS1 |
| Gene Alias: | - |
| Gene Description: | VIM antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "40(TGCCCTTAAAGG,-,0.00),41(GCCCTTAAAGGA,-,0.00)" |
