Difference between revisions of "TSS:Hg 104113.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=-348 | |distance_to_tss=-348 | ||
|end=18140337 | |end=18140337 | ||
| + | |end_of_center_position=18140330 | ||
|entrez_id=783 | |entrez_id=783 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=CACNLB2 | + | |gene_alias=CACNLB2 |
|gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | |gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | ||
|gene_id=783 | |gene_id=783 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=18140321 | |start=18140321 | ||
| + | |start_of_center_position=18140329 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000324631.11 NM_201596 NM_201593 NM_201597 uc001ipr.3 S60415 | |transcript_name=ENST00000324631.11 NM_201596 NM_201593 NM_201597 uc001ipr.3 S60415 | ||
Revision as of 00:39, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 18140329 |
|---|---|
| End of the center position in the TSS region: | 18140330 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000324631.11 NM_201596 NM_201593 NM_201597 uc001ipr.3 S60415 |
|---|---|
| Distance: | 340 |
| Num_trans: | 26 |
| All_trans: | ENST00000324631.11:340 NM_201596:340 NM_201593:340 NM_201597:340 uc001ipr.3:340 S60415:340 BC136409:377 KJ896530:398 AF137376:399 ENST00000352115.10:400 ENST00000377328.5:400 uc001ips.3:400 uc009xjz.2:400 AF423191:400 AY393860:400 AY675091:400 ENST00000468177.1:410 uc057sbx.1:410 AK296471:433 ENST00000467034.1:455 uc057sby.1:455 AK311694:455 NM_001167945:476 NM_201571:476 NM_201572:476 AK307526:476 |
TATA-Box annotation
| Distance to TSS: | -348 |
|---|---|
| Nearest PromoterID: | NM_201596 |
| Entrez ID: | 783 |
| Nearest Unigene: | Hs.59093 |
| Nearest Refseq: | NM_000724 |
| Nearest Ensembl: | ENSG00000165995 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Alias: | CACNLB2 |
| Gene Description: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
