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Difference between revisions of "TSS:Hg 10414.1"

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Line 6: Line 6:
 
|distance_to_tss=-93
 
|distance_to_tss=-93
 
|end=13513845
 
|end=13513845
 +
|end_of_center_position=13513840
 
|entrez_id=126755
 
|entrez_id=126755
 
|gc_percent=0.691542
 
|gc_percent=0.691542
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=13513834
 
|start=13513834
 +
|start_of_center_position=13513839
 
|strand=-
 
|strand=-
 
|transcript_name=NM_001010847
 
|transcript_name=NM_001010847

Revision as of 17:52, 10 May 2019

Basic information about the TSS


TSS ID:hg_10414.1
Species:human
Chr:chr1
TSS Classification:yes
Start:13513834
End:13513845
Strand:-
TSS Score:1
Start of the center position in the TSS region:13513839
End of the center position in the TSS region:13513840



Gene and protein annotation


Transcript_name:NM_001010847
Distance:88
GeneID:126755
HGNC/MGI_ID:HGNC:27005
UniProt_ID:Q5VT99
Gene_name:leucine rich repeat containing 38
Gene_symbol:LRRC38
Gene_synonyms:
Gene_source:HGNC:27005



Transcript annotation


Transcript_name:NM_001010847
Distance:88
Num_trans:4
All_trans:NM_001010847:88 BC016048:172 ENST00000376085.3:-203 uc001avb.4:-203



TATA-Box annotation


Distance to TSS:-93
Nearest PromoterID:NM_001010847
Entrez ID:126755
Nearest Unigene:Hs.657356
Nearest Refseq:NM_001010847
Nearest Ensembl:ENSG00000162494
Gene Name:leucine rich repeat containing 38
Gene Alias:-
Gene Description:leucine rich repeat containing 38
Gene Type:protein-coding
CpG%:0.09
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):