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Difference between revisions of "TSS:Hg 104165.1"

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Line 6: Line 6:
 
|distance_to_tss=-234
 
|distance_to_tss=-234
 
|end=19816220
 
|end=19816220
 +
|end_of_center_position=19816209
 
|entrez_id=84898
 
|entrez_id=84898
 
|gc_percent=0.691542
 
|gc_percent=0.691542
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=19816197
 
|start=19816197
 +
|start_of_center_position=19816208
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000377242.7 ENST00000377252.4 uc001iqh.3 uc001iqg.3
 
|transcript_name=ENST00000377242.7 ENST00000377252.4 uc001iqh.3 uc001iqg.3

Revision as of 00:46, 12 May 2019

Basic information about the TSS


TSS ID:hg_104165.1
Species:human
Chr:chr10
TSS Classification:yes
Start:19816197
End:19816220
Strand:+
TSS Score:1
Start of the center position in the TSS region:19816208
End of the center position in the TSS region:19816209



Gene and protein annotation


Transcript_name:ENST00000377242.7 ENST00000377252.4 uc001iqh.3 uc001iqg.3
Distance:19
GeneID:84898
HGNC/MGI_ID:HGNC:21013
UniProt_ID:Q6UX71
Gene_name:plexin domain containing 2
Gene_symbol:PLXDC2
Gene_synonyms:FLJ14623 TEM7R
Gene_source:HGNC:21013



Transcript annotation


Transcript_name:ENST00000377242.7 ENST00000377252.4 uc001iqh.3 uc001iqg.3
Distance:19
Num_trans:8
All_trans:ENST00000377242.7:19 ENST00000377252.4:19 uc001iqh.3:19 uc001iqg.3:19 AK304591:217 NM_001282736:223 NM_032812:223 AY358486:223



TATA-Box annotation


Distance to TSS:-234
Nearest PromoterID:NM_001282736
Entrez ID:84898
Nearest Unigene:Hs.99472
Nearest Refseq:NM_032812
Nearest Ensembl:ENSG00000120594
Gene Name:plexin domain containing 2
Gene Alias:TEM7R
Gene Description:plexin domain containing 2
Gene Type:protein-coding
CpG%:0.07
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):