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Difference between revisions of "TSS:Hg 104252.1"

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Line 8: Line 8:
 
|distance_to_tss=4638
 
|distance_to_tss=4638
 
|end=22325874
 
|end=22325874
 +
|end_of_center_position=22325848
 
|entrez_id=648
 
|entrez_id=648
 
|flvi-2/bmi-1=
 
|flvi-2/bmi-1=
 
|gc_percent=0.746269
 
|gc_percent=0.746269
|gene_alias=FLVI2/BMI1|PCGF4|RNF51|flvi-2/bmi-1
+
|gene_alias=FLVI2/BMI1
 
|gene_description="BMI1 proto-oncogene, polycomb ring finger"
 
|gene_description="BMI1 proto-oncogene, polycomb ring finger"
 
|gene_id=100532731 648
 
|gene_id=100532731 648
Line 27: Line 28:
 
|species=human
 
|species=human
 
|start=22325821
 
|start=22325821
 +
|start_of_center_position=22325847
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000602524.1 uc057sfm.1
 
|transcript_name=ENST00000602524.1 uc057sfm.1

Revision as of 01:00, 12 May 2019

Basic information about the TSS


TSS ID:hg_104252.1
Species:human
Chr:chr10
TSS Classification:no
Start:22325821
End:22325874
Strand:+
TSS Score:1
Start of the center position in the TSS region:22325847
End of the center position in the TSS region:22325848



Gene and protein annotation


Transcript_name:ENST00000602524.1 uc057sfm.1
Distance:59
GeneID:100532731 648
HGNC/MGI_ID:HGNC:1066 HGNC:48326
UniProt_ID:
Gene_name:"BMI1 proto-oncogene, polycomb ring finger; COMMD3-BMI1 readthrough"
Gene_symbol:BMI1 COMMD3-BMI1
Gene_synonyms:RNF51
Gene_source:HGNC:1066 HGNC:48326



Transcript annotation


Transcript_name:ENST00000602524.1 uc057sfm.1
Distance:59
Num_trans:6
All_trans:ENST00000602524.1:59 uc057sfm.1:59 ENST00000602358.5:-152 uc057sfl.1:-152 ENST00000416820.5:-165 uc057sfk.1:-165



TATA-Box annotation


Distance to TSS:4638
Nearest PromoterID:NM_005180
Entrez ID:648
Nearest Unigene:Hs.380403
Nearest Refseq:NM_005180
Nearest Ensembl:ENSG00000168283
Gene Name:"BMI1 proto-oncogene, polycomb ring finger; COMMD3-BMI1 readthrough"
Gene Alias:FLVI2/BMI1
Gene Description:"BMI1 proto-oncogene, polycomb ring finger"
Gene Type:protein-coding
CpG%:0.13
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):