Difference between revisions of "TSS:Hg 104261.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=922 | |distance_to_tss=922 | ||
|end=22437012 | |end=22437012 | ||
| + | |end_of_center_position=22437007 | ||
|entrez_id=100499489 | |entrez_id=100499489 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=22437001 | |start=22437001 | ||
| + | |start_of_center_position=22437006 | ||
|strand=+ | |strand=+ | ||
|tata_box="-50(GGCTCTATAAAG,-,0.00),-48(CTCTATAAAGCC,+,0.00),-34(GGCTCTATAAAG,-,0.00),-32(CTCTATAAAGCC,+,0.00)" | |tata_box="-50(GGCTCTATAAAG,-,0.00),-48(CTCTATAAAGCC,+,0.00),-34(GGCTCTATAAAG,-,0.00),-32(CTCTATAAAGCC,+,0.00)" | ||
Revision as of 01:01, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22437006 |
|---|---|
| End of the center position in the TSS region: | 22437007 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK295718 |
|---|---|
| Distance: | 68 |
| Num_trans: | 1 |
| All_trans: | AK295718:68 |
TATA-Box annotation
| Distance to TSS: | 922 |
|---|---|
| Nearest PromoterID: | NR_036533 |
| Entrez ID: | 100499489 |
| Nearest Unigene: | Hs.7444 |
| Nearest Refseq: | NR_036533 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100289455 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100499489 |
| Gene Type: | ncRNA |
| CpG%: | 0.135 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-50(GGCTCTATAAAG,-,0.00),-48(CTCTATAAAGCC,+,0.00),-34(GGCTCTATAAAG,-,0.00),-32(CTCTATAAAGCC,+,0.00)" |
