Difference between revisions of "TSS:Hg 104270.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=60 | |distance_to_tss=60 | ||
|end=22928089 | |end=22928089 | ||
| + | |end_of_center_position=22928085 | ||
|entrez_id=219681 | |entrez_id=219681 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=CT81 | + | |gene_alias=CT81 |
|gene_description=armadillo repeat containing 3 | |gene_description=armadillo repeat containing 3 | ||
|gene_id=219681 | |gene_id=219681 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=22928079 | |start=22928079 | ||
| + | |start_of_center_position=22928084 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000447081.5 ENST00000468003.5 ENST00000483596.5 uc057sgk.1 uc057sgl.1 uc057sgm.1 AK057389 | |transcript_name=ENST00000447081.5 ENST00000468003.5 ENST00000483596.5 uc057sgk.1 uc057sgl.1 uc057sgm.1 AK057389 | ||
Revision as of 01:04, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22928084 |
|---|---|
| End of the center position in the TSS region: | 22928085 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000447081.5 ENST00000468003.5 ENST00000483596.5 uc057sgk.1 uc057sgl.1 uc057sgm.1 AK057389 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000447081.5:0 ENST00000468003.5:0 ENST00000483596.5:0 uc057sgk.1:0 uc057sgl.1:0 uc057sgm.1:0 AK057389:0 ENST00000496741.5:-3 ENST00000484642.5:-3 uc057sgi.1:-3 uc057sgj.1:-3 AK302104:-3 ENST00000409049.7:-16 uc031vzq.2:-16 AY436643:-16 ENST00000409983.7:-43 uc010qcv.4:-43 AK302985:-43 BC039312:-49 ENST00000298032.9:-56 ENST00000376528.8:-56 NM_001282746:-56 NM_001282745:-56 NM_001282747:-56 NM_173081:-56 uc001irm.6:-56 uc010qcw.3:-56 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_001282747 |
| Entrez ID: | 219681 |
| Nearest Unigene: | Hs.659807 |
| Nearest Refseq: | NM_173081 |
| Nearest Ensembl: | ENSG00000165309 |
| Gene Name: | armadillo repeat containing 3 |
| Gene Alias: | CT81 |
| Gene Description: | armadillo repeat containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
