Difference between revisions of "TSS:Hg 104289.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=191 | |distance_to_tss=191 | ||
|end=23439468 | |end=23439468 | ||
| + | |end_of_center_position=23439460 | ||
|entrez_id=220213 | |entrez_id=220213 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=DUBA7 | + | |gene_alias=DUBA7 |
|gene_description=OTU deubiquitinase 1 | |gene_description=OTU deubiquitinase 1 | ||
|gene_id=220213 | |gene_id=220213 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=23439451 | |start=23439451 | ||
| + | |start_of_center_position=23439459 | ||
|strand=+ | |strand=+ | ||
|tata_box="-35(GCGCCTATAAGG,-,0.00),-33(GCCTATAAGGGG,+,0.00),-33(GCCTATAAGGGG,-,0.00)" | |tata_box="-35(GCGCCTATAAGG,-,0.00),-33(GCCTATAAGGGG,+,0.00),-33(GCCTATAAGGGG,-,0.00)" | ||
Revision as of 01:07, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23439459 |
|---|---|
| End of the center position in the TSS region: | 23439460 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376495.4 uc001irr.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000376495.4:0 uc001irr.3:0 NM_001145373:-183 AB188491:-183 |
TATA-Box annotation
| Distance to TSS: | 191 |
|---|---|
| Nearest PromoterID: | NM_001145373 |
| Entrez ID: | 220213 |
| Nearest Unigene: | Hs.499042 |
| Nearest Refseq: | NM_001145373 |
| Nearest Ensembl: | ENSG00000165312 |
| Gene Name: | OTU deubiquitinase 1 |
| Gene Alias: | DUBA7 |
| Gene Description: | OTU deubiquitinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GCGCCTATAAGG,-,0.00),-33(GCCTATAAGGGG,+,0.00),-33(GCCTATAAGGGG,-,0.00)" |
