Difference between revisions of "TSS:Hg 104320.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=30722 | |distance_to_tss=30722 | ||
|end=24239516 | |end=24239516 | ||
| + | |end_of_center_position=24239514 | ||
|entrez_id=56243 | |entrez_id=56243 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=24239510 | |start=24239510 | ||
| + | |start_of_center_position=24239513 | ||
|strand=+ | |strand=+ | ||
|tata_box="-31(CTGTTTTTAAGG,-,0.00),-29(GTTTTTAAGGGC,+,0.00),79(TGCTATAAAAGT,-,0.00)" | |tata_box="-31(CTGTTTTTAAGG,-,0.00),-29(GTTTTTAAGGGC,+,0.00),79(TGCTATAAAAGT,-,0.00)" | ||
Revision as of 01:11, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24239513 |
|---|---|
| End of the center position in the TSS region: | 24239514 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000438429.5 uc001irv.2 AK096446 |
|---|---|
| Distance: | -316 |
| Num_trans: | 3 |
| All_trans: | ENST00000438429.5:-316 uc001irv.2:-316 AK096446:-316 |
TATA-Box annotation
| Distance to TSS: | 30722 |
|---|---|
| Nearest PromoterID: | NM_001282768 |
| Entrez ID: | 56243 |
| Nearest Unigene: | Hs.445885 |
| Nearest Refseq: | NM_019590 |
| Nearest Ensembl: | ENSG00000120549 |
| Gene Name: | KIAA1217 |
| Gene Alias: | SKT |
| Gene Description: | KIAA1217 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-31(CTGTTTTTAAGG,-,0.00),-29(GTTTTTAAGGGC,+,0.00),79(TGCTATAAAAGT,-,0.00)" |
