Difference between revisions of "TSS:Hg 104455.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=164 | |distance_to_tss=164 | ||
|end=27504346 | |end=27504346 | ||
| + | |end_of_center_position=27504339 | ||
|entrez_id=22931 | |entrez_id=22931 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=RAB18LI1 | + | |gene_alias=RAB18LI1 |
|gene_description="RAB18, member RAS oncogene family" | |gene_description="RAB18, member RAS oncogene family" | ||
|gene_id=22931 | |gene_id=22931 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=27504330 | |start=27504330 | ||
| + | |start_of_center_position=27504338 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK223153 | |transcript_name=AK223153 | ||
Revision as of 01:32, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 27504338 |
|---|---|
| End of the center position in the TSS region: | 27504339 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK223153 |
|---|---|
| Distance: | 1 |
| Num_trans: | 43 |
| All_trans: | AK223153:1 ENST00000375802.7:-3 uc057skg.1:-3 AL136734:-9 AF274957:9 BC015014:-11 AF087860:-15 ENST00000621805.4:24 uc001itw.5:24 AF136974:-24 AB464117:24 AM393142:24 BT009840:24 CU677165:24 AF498950:24 CR533455:24 AF137372:24 AK001555:24 AK297629:-27 AK299457:-27 AK295443:-27 BC029350:-27 ENST00000465772.5:31 uc057skh.1:31 ENST00000490236.2:-32 uc057skf.1:-32 AY574034:-45 ENST00000484281.1:48 uc057ski.1:48 ENST00000356940.10:-63 uc001itv.5:-63 ENST00000535776.5:-157 ENST00000611151.4:-157 NM_021252:-157 NM_001256412:-157 NM_001256411:-157 NM_001256415:-157 NM_001256410:-157 NR_046172:-157 uc010qdr.3:-157 uc031ptn.1:-157 ENST00000423465.1:273 uc057skj.1:273 |
TATA-Box annotation
| Distance to TSS: | 164 |
|---|---|
| Nearest PromoterID: | NM_001256412 |
| Entrez ID: | 22931 |
| Nearest Unigene: | Hs.406799 |
| Nearest Refseq: | NM_021252 |
| Nearest Ensembl: | ENSG00000099246 |
| Gene Name: | "RAB18, member RAS oncogene family" |
| Gene Alias: | RAB18LI1 |
| Gene Description: | "RAB18, member RAS oncogene family" |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
