Difference between revisions of "TSS:Hg 102455.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=29 |entrez_id=11224 |gc_percent=0.736318 |gene_alias=L35 |gene_description=ribosomal protein L35 |gene_name=RPL35 |gene_type=pro...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000493018.5:0 uc064vql.1:0 ENST00000487431.1:-1 uc064vqm.1:-1 U12465:2 BC071915:3 BC000348:-10 ENST00000373570.8:15 uc064vqk.1:15 AK291072:-20 BC010919:-22 D28448:-22 ENST00000348462.5:-26 ENST00000629845.1:-26 NM_007209:-26 uc004boy.2:-26 uc064vqn.1:-26 ENST00000495728.1:-46 uc064vqo.1:-46 BC094828:374 CU674168:374 KJ893256:374 KJ898381:374 DQ891363:374 DQ894543:374 CR456877:374 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=0 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| + | |end=124861935 | ||
|entrez_id=11224 | |entrez_id=11224 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=L35 | |gene_alias=L35 | ||
|gene_description=ribosomal protein L35 | |gene_description=ribosomal protein L35 | ||
| − | |gene_name=RPL35 | + | |gene_id=11224 |
| + | |gene_name=ribosomal protein L35 | ||
| + | |gene_source=HGNC:10344 | ||
| + | |gene_symbol=RPL35 | ||
| + | |gene_synonyms=L35 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10344 | ||
|nearest_ensembl=ENSG00000136942 | |nearest_ensembl=ENSG00000136942 | ||
|nearest_promoter_id=NM_007209 | |nearest_promoter_id=NM_007209 | ||
|nearest_refseq=NM_007209 | |nearest_refseq=NM_007209 | ||
|nearest_unigene=Hs.182825 | |nearest_unigene=Hs.182825 | ||
| + | |num_trans=26 | ||
| + | |species=human | ||
| + | |start=124861929 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000493018.5 uc064vql.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102455.1 | |tss_id=hg_102455.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F2Z388 | ||
}} | }} | ||
Revision as of 19:27, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000493018.5 uc064vql.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000493018.5:0 uc064vql.1:0 ENST00000487431.1:-1 uc064vqm.1:-1 U12465:2 BC071915:3 BC000348:-10 ENST00000373570.8:15 uc064vqk.1:15 AK291072:-20 BC010919:-22 D28448:-22 ENST00000348462.5:-26 ENST00000629845.1:-26 NM_007209:-26 uc004boy.2:-26 uc064vqn.1:-26 ENST00000495728.1:-46 uc064vqo.1:-46 BC094828:374 CU674168:374 KJ893256:374 KJ898381:374 DQ891363:374 DQ894543:374 CR456877:374 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_007209 |
| Entrez ID: | 11224 |
| Nearest Unigene: | Hs.182825 |
| Nearest Refseq: | NM_007209 |
| Nearest Ensembl: | ENSG00000136942 |
| Gene Name: | ribosomal protein L35 |
| Gene Alias: | L35 |
| Gene Description: | ribosomal protein L35 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
