Difference between revisions of "TSS:Hg 104509.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
|end=28743697 | |end=28743697 | ||
| + | |end_of_center_position=28743690 | ||
|entrez_id=101929218 | |entrez_id=101929218 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=28743681 | |start=28743681 | ||
| + | |start_of_center_position=28743689 | ||
|strand=+ | |strand=+ | ||
|tata_box="13(CCCTCTTAGAGG,-,0.00),14(CCTCTTAGAGGT,+,0.00)" | |tata_box="13(CCCTCTTAGAGG,-,0.00),14(CCTCTTAGAGGT,+,0.00)" | ||
Revision as of 01:42, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 28743689 |
|---|---|
| End of the center position in the TSS region: | 28743690 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_120652 |
|---|---|
| Distance: | -32 |
| Num_trans: | 4 |
| All_trans: | NR_120652:-32 AK058127:38 ENST00000456082.1:48 uc057sma.1:48 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NR_120652 |
| Entrez ID: | 101929218 |
| Nearest Unigene: | Hs.224866 |
| Nearest Refseq: | NR_120652 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 1517 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1517 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "13(CCCTCTTAGAGG,-,0.00),14(CCTCTTAGAGGT,+,0.00)" |
