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Difference between revisions of "TSS:Hg 104734.1"

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Line 6: Line 6:
 
|distance_to_tss=43
 
|distance_to_tss=43
 
|end=42475553
 
|end=42475553
 +
|end_of_center_position=42475534
 
|entrez_id=84856
 
|entrez_id=84856
 
|gc_percent=0.517413
 
|gc_percent=0.517413
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=42475514
 
|start=42475514
 +
|start_of_center_position=42475533
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000429940.6 uc001izy.4 BC007394 AK092104
 
|transcript_name=ENST00000429940.6 uc001izy.4 BC007394 AK092104

Revision as of 02:36, 12 May 2019

Basic information about the TSS


TSS ID:hg_104734.1
Species:human
Chr:chr10
TSS Classification:yes
Start:42475514
End:42475553
Strand:+
TSS Score:1
Start of the center position in the TSS region:42475533
End of the center position in the TSS region:42475534



Gene and protein annotation


Transcript_name:ENST00000429940.6 uc001izy.4 BC007394 AK092104
Distance:0
GeneID:84856
HGNC/MGI_ID:HGNC:28269
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 839
Gene_symbol:LINC00839
Gene_synonyms:
Gene_source:HGNC:28269



Transcript annotation


Transcript_name:ENST00000429940.6 uc001izy.4 BC007394 AK092104
Distance:0
Num_trans:9
All_trans:ENST00000429940.6:0 uc001izy.4:0 BC007394:0 AK092104:0 NR_026827:-24 AK293138:-24 ENST00000424751.2:75 uc001izz.3:75 AK090789:75



TATA-Box annotation


Distance to TSS:43
Nearest PromoterID:NR_026827
Entrez ID:84856
Nearest Unigene:Hs.55977
Nearest Refseq:NM_032770
Nearest Ensembl:ENSG00000185904
Gene Name:long intergenic non-protein coding RNA 839
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 839
Gene Type:ncRNA
CpG%:0.03
GC%:0.517413
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):