Difference between revisions of "TSS:Hg 104752.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=-7092 | |distance_to_tss=-7092 | ||
|end=43147810 | |end=43147810 | ||
| + | |end_of_center_position=43147806 | ||
|entrez_id=55454 | |entrez_id=55454 | ||
|gc_percent=0.263682 | |gc_percent=0.263682 | ||
| − | |gene_alias=CHGN2 | + | |gene_alias=CHGN2 |
|gene_description=chondroitin sulfate N-acetylgalactosaminyltransferase 2 | |gene_description=chondroitin sulfate N-acetylgalactosaminyltransferase 2 | ||
|gene_name=CSGALNACT2 | |gene_name=CSGALNACT2 | ||
| Line 23: | Line 24: | ||
|species=human | |species=human | ||
|start=43147800 | |start=43147800 | ||
| + | |start_of_center_position=43147805 | ||
|strand=+ | |strand=+ | ||
|tata_box="-92(ATTTATATAGGC,+,0.00),-4(TGCTTTTTAAAG,-,0.00),-2(CTTTTTAAAGTA,+,0.00)" | |tata_box="-92(ATTTATATAGGC,+,0.00),-4(TGCTTTTTAAAG,-,0.00),-2(CTTTTTAAAGTA,+,0.00)" | ||
Revision as of 02:39, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 43147805 |
|---|---|
| End of the center position in the TSS region: | 43147806 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -7092 |
|---|---|
| Nearest PromoterID: | NM_001319654 |
| Entrez ID: | 55454 |
| Nearest Unigene: | Hs.657569 |
| Nearest Refseq: | NM_018590 |
| Nearest Ensembl: | ENSG00000169826 |
| Gene Name: | CSGALNACT2 |
| Gene Alias: | CHGN2 |
| Gene Description: | chondroitin sulfate N-acetylgalactosaminyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.263682 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-92(ATTTATATAGGC,+,0.00),-4(TGCTTTTTAAAG,-,0.00),-2(CTTTTTAAAGTA,+,0.00)" |
