Difference between revisions of "TSS:Hg 104789.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=82 | |distance_to_tss=82 | ||
|end=45374260 | |end=45374260 | ||
| + | |end_of_center_position=45374248 | ||
|entrez_id=240 | |entrez_id=240 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=5-LO | + | |gene_alias=5-LO |
|gene_description=arachidonate 5-lipoxygenase | |gene_description=arachidonate 5-lipoxygenase | ||
|gene_id=240 | |gene_id=240 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=45374235 | |start=45374235 | ||
| + | |start_of_center_position=45374247 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC040450 J03600 J03571 | |transcript_name=BC040450 J03600 J03571 | ||
Revision as of 02:51, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 45374247 |
|---|---|
| End of the center position in the TSS region: | 45374248 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC040450 J03600 J03571 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | BC040450:0 J03600:0 J03571:0 ENST00000374391.6:-9 uc001jce.5:-9 BC034464:-9 AB590536:16 HQ258335:18 KJ890662:18 KR711721:18 ENST00000612635.4:20 uc057syn.1:20 AK315223:-20 JQ728550:20 HM592258:20 HM592259:20 HM592260:20 HM592261:20 AK225603:-23 BC130332:-23 BC132677:-23 BC143985:-23 BC143986:-23 AB208946:-55 ENST00000542434.5:-60 NM_001256154:-60 NM_001256153:-60 NM_000698:-60 uc010qfg.3:-60 |
TATA-Box annotation
| Distance to TSS: | 82 |
|---|---|
| Nearest PromoterID: | NM_001320862 |
| Entrez ID: | 240 |
| Nearest Unigene: | Hs.89499 |
| Nearest Refseq: | NM_000698 |
| Nearest Ensembl: | ENSG00000012779 |
| Gene Name: | arachidonate 5-lipoxygenase |
| Gene Alias: | 5-LO |
| Gene Description: | arachidonate 5-lipoxygenase |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
