Difference between revisions of "TSS:Hg 104790.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=203 | |distance_to_tss=203 | ||
|end=45374374 | |end=45374374 | ||
| + | |end_of_center_position=45374369 | ||
|entrez_id=240 | |entrez_id=240 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=5-LO | + | |gene_alias=5-LO |
|gene_description=arachidonate 5-lipoxygenase | |gene_description=arachidonate 5-lipoxygenase | ||
|gene_id=240 | |gene_id=240 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=45374363 | |start=45374363 | ||
| + | |start_of_center_position=45374368 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000612635.4 uc057syn.1 JQ728550 HM592258 HM592259 HM592260 HM592261 | |transcript_name=ENST00000612635.4 uc057syn.1 JQ728550 HM592258 HM592259 HM592260 HM592261 | ||
Revision as of 02:51, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 45374368 |
|---|---|
| End of the center position in the TSS region: | 45374369 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000612635.4 uc057syn.1 JQ728550 HM592258 HM592259 HM592260 HM592261 |
|---|---|
| Distance: | -84 |
| Num_trans: | 29 |
| All_trans: | ENST00000612635.4:-84 uc057syn.1:-84 JQ728550:-84 HM592258:-84 HM592259:-84 HM592260:-84 HM592261:-84 HQ258335:-86 KJ890662:-86 KR711721:-86 AB590536:-88 J03571:-115 J03600:-126 BC040450:-127 ENST00000374391.6:-137 uc001jce.5:-137 BC034464:-137 AK315223:-148 AK225603:-151 BC130332:-151 BC132677:-151 BC143985:-151 BC143986:-151 AB208946:-183 ENST00000542434.5:-188 NM_001256154:-188 NM_001256153:-188 NM_000698:-188 uc010qfg.3:-188 |
TATA-Box annotation
| Distance to TSS: | 203 |
|---|---|
| Nearest PromoterID: | NM_001320862 |
| Entrez ID: | 240 |
| Nearest Unigene: | Hs.89499 |
| Nearest Refseq: | NM_000698 |
| Nearest Ensembl: | ENSG00000012779 |
| Gene Name: | arachidonate 5-lipoxygenase |
| Gene Alias: | 5-LO |
| Gene Description: | arachidonate 5-lipoxygenase |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
