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Difference between revisions of "TSS:Hg 105275.1"

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Line 8: Line 8:
 
|distance_to_tss=18
 
|distance_to_tss=18
 
|end=68901334
 
|end=68901334
 +
|end_of_center_position=68901297
 
|entrez_id=79009
 
|entrez_id=79009
 
|gc_percent=0.646766
 
|gc_percent=0.646766
|gene_alias=GU2|GUB|RH-II/GuB|mcdrh
+
|gene_alias=GU2
 
|gene_description=DExD-box helicase 50
 
|gene_description=DExD-box helicase 50
 
|gene_id=79009
 
|gene_id=79009
Line 27: Line 28:
 
|species=human
 
|species=human
 
|start=68901258
 
|start=68901258
 +
|start_of_center_position=68901296
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000373585.7 ENST00000483593.5 ENST00000610822.1 ENST00000471475.1 NM_024045 uc001jou.3 uc057tse.1 uc057tsf.1 uc057tsg.1 BC000272 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263
 
|transcript_name=ENST00000373585.7 ENST00000483593.5 ENST00000610822.1 ENST00000471475.1 NM_024045 uc001jou.3 uc057tse.1 uc057tsf.1 uc057tsg.1 BC000272 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263

Revision as of 04:26, 12 May 2019

Basic information about the TSS


TSS ID:hg_105275.1
Species:human
Chr:chr10
TSS Classification:yes
Start:68901258
End:68901334
Strand:+
TSS Score:1
Start of the center position in the TSS region:68901296
End of the center position in the TSS region:68901297



Gene and protein annotation


Transcript_name:ENST00000373585.7 ENST00000483593.5 ENST00000610822.1 ENST00000471475.1 NM_024045 uc001jou.3 uc057tse.1 uc057tsf.1 uc057tsg.1 BC000272 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263
Distance:0
GeneID:79009
HGNC/MGI_ID:HGNC:17906
UniProt_ID:A0A087WVC1 B4DED6 B4DW97 K0J110 Q53FI9 Q9BQ39 S4R3G6 S4R3V4
Gene_name:DEAD-box helicase 50
Gene_symbol:DDX50
Gene_synonyms:GU2 GUB MGC3199 RH-II/GuB
Gene_source:HGNC:17906



Transcript annotation


Transcript_name:ENST00000373585.7 ENST00000483593.5 ENST00000610822.1 ENST00000471475.1 NM_024045 uc001jou.3 uc057tse.1 uc057tsf.1 uc057tsg.1 BC000272 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263
Distance:0
Num_trans:20
All_trans:ENST00000373585.7:0 ENST00000483593.5:0 ENST00000610822.1:0 ENST00000471475.1:0 NM_024045:0 uc001jou.3:0 uc057tse.1:0 uc057tsf.1:0 uc057tsg.1:0 BC000272:0 AK223297:0 AB051075:0 AF334103:0 AK301431:0 AK293577:0 BC014263:0 CU674120:51 DQ892547:51 DQ895758:51 KJ894630:51



TATA-Box annotation


Distance to TSS:18
Nearest PromoterID:NM_024045
Entrez ID:79009
Nearest Unigene:Hs.522984
Nearest Refseq:NM_024045
Nearest Ensembl:ENSG00000107625
Gene Name:DEAD-box helicase 50
Gene Alias:GU2
Gene Description:DExD-box helicase 50
Gene Type:protein-coding
CpG%:0.1
GC%:0.646766
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):