Difference between revisions of "TSS:Hg 105365.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=688 | |distance_to_tss=688 | ||
|end=69802581 | |end=69802581 | ||
| + | |end_of_center_position=69802576 | ||
|entrez_id=1305 | |entrez_id=1305 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=CMS19 | + | |gene_alias=CMS19 |
|gene_description=collagen type XIII alpha 1 chain | |gene_description=collagen type XIII alpha 1 chain | ||
|gene_id=1305 | |gene_id=1305 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=69802570 | |start=69802570 | ||
| + | |start_of_center_position=69802575 | ||
|strand=+ | |strand=+ | ||
|transcript_name=M59217 | |transcript_name=M59217 | ||
Revision as of 04:36, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 69802575 |
|---|---|
| End of the center position in the TSS region: | 69802576 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | M59217 |
|---|---|
| Distance: | -19 |
| Num_trans: | 12 |
| All_trans: | M59217:-19 ENST00000517713.5:-147 ENST00000522165.5:-147 ENST00000520133.5:-147 uc057tuo.1:-147 uc057tup.1:-147 uc057tuq.1:-147 ENST00000520267.5:-453 ENST00000398969.7:-453 uc057tum.1:-453 uc057tun.1:-453 BC136385:-453 |
TATA-Box annotation
| Distance to TSS: | 688 |
|---|---|
| Nearest PromoterID: | NM_080805 |
| Entrez ID: | 1305 |
| Nearest Unigene: | Hs.695934 |
| Nearest Refseq: | NM_005203 |
| Nearest Ensembl: | ENSG00000197467 |
| Gene Name: | collagen type XIII alpha 1 |
| Gene Alias: | CMS19 |
| Gene Description: | collagen type XIII alpha 1 chain |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
