Difference between revisions of "TSS:Hg 105367.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=723 | |distance_to_tss=723 | ||
|end=69802619 | |end=69802619 | ||
| + | |end_of_center_position=69802611 | ||
|entrez_id=1305 | |entrez_id=1305 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=CMS19 | + | |gene_alias=CMS19 |
|gene_description=collagen type XIII alpha 1 chain | |gene_description=collagen type XIII alpha 1 chain | ||
|gene_id=1305 | |gene_id=1305 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=69802602 | |start=69802602 | ||
| + | |start_of_center_position=69802610 | ||
|strand=+ | |strand=+ | ||
|transcript_name=M59217 | |transcript_name=M59217 | ||
Revision as of 04:36, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 69802610 |
|---|---|
| End of the center position in the TSS region: | 69802611 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | M59217 |
|---|---|
| Distance: | -51 |
| Num_trans: | 12 |
| All_trans: | M59217:-51 ENST00000517713.5:-179 ENST00000522165.5:-179 ENST00000520133.5:-179 uc057tuo.1:-179 uc057tup.1:-179 uc057tuq.1:-179 ENST00000520267.5:-485 ENST00000398969.7:-485 uc057tum.1:-485 uc057tun.1:-485 BC136385:-485 |
TATA-Box annotation
| Distance to TSS: | 723 |
|---|---|
| Nearest PromoterID: | NM_080805 |
| Entrez ID: | 1305 |
| Nearest Unigene: | Hs.695934 |
| Nearest Refseq: | NM_005203 |
| Nearest Ensembl: | ENSG00000197467 |
| Gene Name: | collagen type XIII alpha 1 |
| Gene Alias: | CMS19 |
| Gene Description: | collagen type XIII alpha 1 chain |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
