Difference between revisions of "TSS:Mm 152453.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK155789:-42 |chr=chr19 |cpg_percent=0.02 |distance=-42 |distance_to_tss=-831 |end=10841720 |entrez_id=65221 |gc_percent=0.527363 |gene_alias=Ci1|cI-1 |...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AK155789:-42 | |all_trans=AK155789:-42 | ||
| + | |cI-1= | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-831 | |distance_to_tss=-831 | ||
|end=10841720 | |end=10841720 | ||
| + | |end_of_center_position=10841714 | ||
|entrez_id=65221 | |entrez_id=65221 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=Ci1 | + | |gene_alias=Ci1 |
|gene_description="solute carrier family 15, member 3" | |gene_description="solute carrier family 15, member 3" | ||
|gene_id=100038352 | |gene_id=100038352 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=10841706 | |start=10841706 | ||
| + | |start_of_center_position=10841713 | ||
|strand=- | |strand=- | ||
|tata_box="-81(ATGTTTAAAGGG,-,0.00)" | |tata_box="-81(ATGTTTAAAGGG,-,0.00)" | ||
Revision as of 20:36, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 10841713 |
|---|---|
| End of the center position in the TSS region: | 10841714 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK155789 |
|---|---|
| Distance: | -42 |
| Num_trans: | 1 |
| All_trans: | AK155789:-42 |
TATA-Box annotation
| Distance to TSS: | -831 |
|---|---|
| Nearest PromoterID: | NM_023044 |
| Entrez ID: | 65221 |
| Nearest Unigene: | Mm.27387 |
| Nearest Refseq: | NM_023044 |
| Nearest Ensembl: | ENSMUSG00000024737 |
| Gene Name: | predicted gene 10802 |
| Gene Alias: | Ci1 |
| Gene Description: | "solute carrier family 15, member 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-81(ATGTTTAAAGGG,-,0.00)" |
