Difference between revisions of "TSS:Hg 105491.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
|end=72273930 | |end=72273930 | ||
| + | |end_of_center_position=72273923 | ||
|entrez_id=54541 | |entrez_id=54541 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=Dig2 | + | |gene_alias=Dig2 |
|gene_description=DNA damage inducible transcript 4 | |gene_description=DNA damage inducible transcript 4 | ||
|gene_id=54541 | |gene_id=54541 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=72273914 | |start=72273914 | ||
| + | |start_of_center_position=72273922 | ||
|strand=+ | |strand=+ | ||
|tata_box="-32(GTCCTTATAGGC,-,0.00),-30(CCTTATAGGCTG,+,0.00)" | |tata_box="-32(GTCCTTATAGGC,-,0.00),-30(CCTTATAGGCTG,+,0.00)" | ||
Revision as of 04:59, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 72273922 |
|---|---|
| End of the center position in the TSS region: | 72273923 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000307365.3 ENST00000473155.1 NM_019058 uc001jsx.2 uc057tya.1 AL136668 AK000507 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000307365.3:0 ENST00000473155.1:0 NM_019058:0 uc001jsx.2:0 uc057tya.1:0 AL136668:0 AK000507:0 BC007714:1 AF335324:6 BC015236:15 AY090097:72 ENST00000471240.1:89 uc057tyb.1:89 BC000708:92 AM392607:283 DQ890984:283 DQ894159:283 AB587474:285 KJ894039:286 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_019058 |
| Entrez ID: | 54541 |
| Nearest Unigene: | Hs.744875 |
| Nearest Refseq: | NM_019058 |
| Nearest Ensembl: | ENSG00000168209 |
| Gene Name: | DNA damage inducible transcript 4 |
| Gene Alias: | Dig2 |
| Gene Description: | DNA damage inducible transcript 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(GTCCTTATAGGC,-,0.00),-30(CCTTATAGGCTG,+,0.00)" |
