Difference between revisions of "TSS:Hg 105516.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=184 | |distance_to_tss=184 | ||
|end=72893746 | |end=72893746 | ||
| + | |end_of_center_position=72893741 | ||
|entrez_id=170392 | |entrez_id=170392 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=72893734 | |start=72893734 | ||
| + | |start_of_center_position=72893740 | ||
|strand=+ | |strand=+ | ||
|tata_box="-35(GGCCTTAAAAAA,-,0.00)" | |tata_box="-35(GGCCTTAAAAAA,-,0.00)" | ||
Revision as of 05:03, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 72893740 |
|---|---|
| End of the center position in the TSS region: | 72893741 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY013707 |
|---|---|
| Distance: | -10 |
| Num_trans: | 12 |
| All_trans: | AY013707:-10 KJ903964:53 HQ258178:53 AY358339:-132 ENST00000622652.1:-151 uc057tze.1:-151 BC126440:-151 ENST00000334011.9:-154 uc001jte.2:-154 AK096435:-154 NM_152635:-179 NR_130125:-179 |
TATA-Box annotation
| Distance to TSS: | 184 |
|---|---|
| Nearest PromoterID: | NR_130125 |
| Entrez ID: | 170392 |
| Nearest Unigene: | Hs.8366 |
| Nearest Refseq: | NM_152635 |
| Nearest Ensembl: | ENSG00000138315 |
| Gene Name: | oncoprotein induced transcript 3 |
| Gene Alias: | LZP |
| Gene Description: | oncoprotein induced transcript 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GGCCTTAAAAAA,-,0.00)" |
