Difference between revisions of "TSS:Hg 10561.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=-429 | |distance_to_tss=-429 | ||
|end=16981132 | |end=16981132 | ||
| + | |end_of_center_position=16981107 | ||
|entrez_id=4237 | |entrez_id=4237 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=MAGP | + | |gene_alias=MAGP |
|gene_description=microfibrillar associated protein 2 | |gene_description=microfibrillar associated protein 2 | ||
|gene_id=4237 | |gene_id=4237 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=16981081 | |start=16981081 | ||
| + | |start_of_center_position=16981106 | ||
|strand=- | |strand=- | ||
|tata_box="-48(CTCTAGAAAAGG,-,0.00)" | |tata_box="-48(CTCTAGAAAAGG,-,0.00)" | ||
Revision as of 18:32, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 16981106 |
|---|---|
| End of the center position in the TSS region: | 16981107 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375535.3 uc001azw.4 |
|---|---|
| Distance: | 247 |
| Num_trans: | 14 |
| All_trans: | ENST00000375535.3:247 uc001azw.4:247 NM_002403:404 NM_001135248:404 BC015039:404 AK222751:442 AK301655:-446 ENST00000476788.5:450 uc057ctb.1:450 NM_017459:-454 NM_001135247:-454 ENST00000490075.5:461 uc057cta.1:461 BC028033:461 |
TATA-Box annotation
| Distance to TSS: | -429 |
|---|---|
| Nearest PromoterID: | NM_002403 |
| Entrez ID: | 4237 |
| Nearest Unigene: | Hs.389137 |
| Nearest Refseq: | NM_002403 |
| Nearest Ensembl: | ENSG00000117122 |
| Gene Name: | microfibrillar associated protein 2 |
| Gene Alias: | MAGP |
| Gene Description: | microfibrillar associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-48(CTCTAGAAAAGG,-,0.00)" |
