Personal tools

Difference between revisions of "TSS:Hg 105610.1"

From referenceTSS

Jump to: navigation, search
Line 7: Line 7:
 
|distance_to_tss=-129
 
|distance_to_tss=-129
 
|end=75111534
 
|end=75111534
 +
|end_of_center_position=75111506
 
|entrez_id=142891
 
|entrez_id=142891
 
|gc_percent=0.771144
 
|gc_percent=0.771144
|gene_alias=HEL-177|SMSr
+
|gene_alias=HEL-177
 
|gene_description=sterile alpha motif domain containing 8
 
|gene_description=sterile alpha motif domain containing 8
 
|gene_id=142891
 
|gene_id=142891
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=75111477
 
|start=75111477
 +
|start_of_center_position=75111505
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000372690.7 uc057ufy.1
 
|transcript_name=ENST00000372690.7 uc057ufy.1

Revision as of 05:20, 12 May 2019

Basic information about the TSS


TSS ID:hg_105610.1
Species:human
Chr:chr10
TSS Classification:yes
Start:75111477
End:75111534
Strand:+
TSS Score:1
Start of the center position in the TSS region:75111505
End of the center position in the TSS region:75111506



Gene and protein annotation


Transcript_name:ENST00000372690.7 uc057ufy.1
Distance:-7
GeneID:142891
HGNC/MGI_ID:HGNC:26320
UniProt_ID:A0A0A0MRR2
Gene_name:sterile alpha motif domain containing 8
Gene_symbol:SAMD8
Gene_synonyms:FLJ25082 SMSr
Gene_source:HGNC:26320



Transcript annotation


Transcript_name:ENST00000372690.7 uc057ufy.1
Distance:-7
Num_trans:12
All_trans:ENST00000372690.7:-7 uc057ufy.1:-7 ENST00000542569.5:101 NM_144660:101 NM_001174156:101 uc001jwx.2:101 BC080593:101 ENST00000372687.4:175 uc001jwy.3:175 AK057811:175 EU668332:175 GQ472208:175



TATA-Box annotation


Distance to TSS:-129
Nearest PromoterID:NM_001174156
Entrez ID:142891
Nearest Unigene:Hs.744986
Nearest Refseq:NM_144660
Nearest Ensembl:ENSG00000156671
Gene Name:sterile alpha motif domain containing 8
Gene Alias:HEL-177
Gene Description:sterile alpha motif domain containing 8
Gene Type:protein-coding
CpG%:0.14
GC%:0.771144
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):