Difference between revisions of "TSS:Hg 105844.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-14 | |distance_to_tss=-14 | ||
|end=80131677 | |end=80131677 | ||
| + | |end_of_center_position=80131669 | ||
|entrez_id=219348 | |entrez_id=219348 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=80131660 | |start=80131660 | ||
| + | |start_of_center_position=80131668 | ||
|strand=+ | |strand=+ | ||
|tata_box="-41(GGCTTTTAAAAG,-,0.00),-40(GCTTTTAAAAGA,+,0.00),-40(GCTTTTAAAAGA,-,0.00),-39(CTTTTAAAAGAT,+,0.00)" | |tata_box="-41(GGCTTTTAAAAG,-,0.00),-40(GCTTTTAAAAGA,+,0.00),-40(GCTTTTAAAAGA,-,0.00),-39(CTTTTAAAAGAT,+,0.00)" | ||
Revision as of 05:53, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 80131668 |
|---|---|
| End of the center position in the TSS region: | 80131669 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372270.6 uc057umr.1 |
|---|---|
| Distance: | 5 |
| Num_trans: | 2 |
| All_trans: | ENST00000372270.6:5 uc057umr.1:5 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NR_138551 |
| Entrez ID: | 219348 |
| Nearest Unigene: | Hs.204947 |
| Nearest Refseq: | NM_001012973 |
| Nearest Ensembl: | ENSG00000189129 |
| Gene Name: | placenta specific 9 |
| Gene Alias: | - |
| Gene Description: | placenta specific 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-41(GGCTTTTAAAAG,-,0.00),-40(GCTTTTAAAAGA,+,0.00),-40(GCTTTTAAAAGA,-,0.00),-39(CTTTTAAAAGAT,+,0.00)" |
