Difference between revisions of "TSS:Hg 106078.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=-255 | |distance_to_tss=-255 | ||
|end=88879936 | |end=88879936 | ||
| + | |end_of_center_position=88879932 | ||
|entrez_id=57559 | |entrez_id=57559 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=ALMalpha | + | |gene_alias=ALMalpha |
|gene_description=STAM binding protein like 1 | |gene_description=STAM binding protein like 1 | ||
|gene_id=57559 | |gene_id=57559 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=88879927 | |start=88879927 | ||
| + | |start_of_center_position=88879931 | ||
|strand=+ | |strand=+ | ||
|tata_box="27(AGTCTTAAAAGG,-,0.00),28(GTCTTAAAAGGC,+,0.00)" | |tata_box="27(AGTCTTAAAAGG,-,0.00),28(GTCTTAAAAGGC,+,0.00)" | ||
Revision as of 06:27, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 88879931 |
|---|---|
| End of the center position in the TSS region: | 88879932 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB037794 |
|---|---|
| Distance: | -62 |
| Num_trans: | 10 |
| All_trans: | AB037794:-62 ENST00000371926.7:-194 ENST00000371927.7:-194 uc001kfk.5:-194 uc010qmx.3:-194 NM_020799:251 ENST00000461650.1:288 uc057usz.1:288 AK056086:322 BC010846:333 |
TATA-Box annotation
| Distance to TSS: | -255 |
|---|---|
| Nearest PromoterID: | NM_020799 |
| Entrez ID: | 57559 |
| Nearest Unigene: | Hs.16229 |
| Nearest Refseq: | NM_020799 |
| Nearest Ensembl: | ENSG00000138134 |
| Gene Name: | STAM binding protein like 1 |
| Gene Alias: | ALMalpha |
| Gene Description: | STAM binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "27(AGTCTTAAAAGG,-,0.00),28(GTCTTAAAAGGC,+,0.00)" |
