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Difference between revisions of "TSS:Hg 106111.1"

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Line 16: Line 16:
 
|distance_to_tss=98
 
|distance_to_tss=98
 
|end=89302055
 
|end=89302055
 +
|end_of_center_position=89302047
 
|entrez_id=3433
 
|entrez_id=3433
 
|gc_percent=0.447761
 
|gc_percent=0.447761
|gene_alias=G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42
+
|gene_alias=G10P2
 
|gene_description=interferon induced protein with tetratricopeptide repeats 2
 
|gene_description=interferon induced protein with tetratricopeptide repeats 2
 
|gene_id=3433
 
|gene_id=3433
Line 34: Line 35:
 
|species=human
 
|species=human
 
|start=89302038
 
|start=89302038
 +
|start_of_center_position=89302046
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000611722.1 uc057uug.1 BC005987 BC032839 AK300431
 
|transcript_name=ENST00000611722.1 uc057uug.1 BC005987 BC032839 AK300431

Revision as of 06:37, 12 May 2019

Basic information about the TSS


TSS ID:hg_106111.1
Species:human
Chr:chr10
TSS Classification:no
Start:89302038
End:89302055
Strand:+
TSS Score:1
Start of the center position in the TSS region:89302046
End of the center position in the TSS region:89302047



Gene and protein annotation


Transcript_name:ENST00000611722.1 uc057uug.1 BC005987 BC032839 AK300431
Distance:0
GeneID:3433
HGNC/MGI_ID:HGNC:5409
UniProt_ID:A0A087X279 B4DTZ5 Q05DN2 Q8IZ03
Gene_name:interferon induced protein with tetratricopeptide repeats 2
Gene_symbol:IFIT2
Gene_synonyms:GARG-39 IFI-54 ISG-54K cig42
Gene_source:HGNC:5409



Transcript annotation


Transcript_name:ENST00000611722.1 uc057uug.1 BC005987 BC032839 AK300431
Distance:0
Num_trans:9
All_trans:ENST00000611722.1:0 uc057uug.1:0 BC005987:0 BC032839:0 AK300431:0 AK312831:-39 ENST00000371826.3:-84 uc009xts.4:-84 NM_001547:-90



TATA-Box annotation


Distance to TSS:98
Nearest PromoterID:NM_001547
Entrez ID:3433
Nearest Unigene:Hs.437609
Nearest Refseq:NM_001547
Nearest Ensembl:ENSG00000119922
Gene Name:interferon induced protein with tetratricopeptide repeats 2
Gene Alias:G10P2
Gene Description:interferon induced protein with tetratricopeptide repeats 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):