Difference between revisions of "TSS:Mm 161014.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007mqf.1:-23 ENSMUST00000053440.7:78 AK054172:78 ENSMUST00000147037.1:-446 BC085159:-446 ENSMUST00000150358.7:-452 uc007mqd.1:-453 uc007mqe.1:-453 BC0...") |
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|distance_to_tss=479 | |distance_to_tss=479 | ||
|end=119229051 | |end=119229051 | ||
| + | |end_of_center_position=119229051 | ||
|entrez_id=207607 | |entrez_id=207607 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
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|species=mouse | |species=mouse | ||
|start=119229050 | |start=119229050 | ||
| + | |start_of_center_position=119229050 | ||
|strand=+ | |strand=+ | ||
|transcript_name=uc007mqf.1 | |transcript_name=uc007mqf.1 | ||
Revision as of 12:59, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119229050 |
|---|---|
| End of the center position in the TSS region: | 119229051 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | uc007mqf.1 |
|---|---|
| Distance: | -23 |
| Num_trans: | 13 |
| All_trans: | uc007mqf.1:-23 ENSMUST00000053440.7:78 AK054172:78 ENSMUST00000147037.1:-446 BC085159:-446 ENSMUST00000150358.7:-452 uc007mqd.1:-453 uc007mqe.1:-453 BC072591:-453 ENSMUST00000035935.8:-479 NM_175430:-479 uc007mqc.1:-479 AK046971:-479 |
TATA-Box annotation
| Distance to TSS: | 479 |
|---|---|
| Nearest PromoterID: | NM_175430 |
| Entrez ID: | 207607 |
| Nearest Unigene: | Mm.189885 |
| Nearest Refseq: | NM_175430 |
| Nearest Ensembl: | ENSMUSG00000039963 |
| Gene Name: | coiled-coil domain containing 40 |
| Gene Alias: | B930008I02Rik |
| Gene Description: | coiled-coil domain containing 40 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
