Difference between revisions of "TSS:Mm 161022.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000151495.7:-119 BC069960:-119 FM204885:-130 FM204886:-130 NM_001146073:-179 uc007mvm.2:-183 uc033gcb.1:-183 |chr=chr11 |cpg_percent=0.03 |dist...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=179 | |distance_to_tss=179 | ||
|end=121207822 | |end=121207822 | ||
| + | |end_of_center_position=121207822 | ||
|entrez_id=238023 | |entrez_id=238023 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=121207821 | |start=121207821 | ||
| + | |start_of_center_position=121207821 | ||
|strand=+ | |strand=+ | ||
|tata_box="-89(GGACCTTAAAGG,-,0.00),-88(GACCTTAAAGGA,-,0.00)" | |tata_box="-89(GGACCTTAAAGG,-,0.00),-88(GACCTTAAAGGA,-,0.00)" | ||
Revision as of 13:35, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 121207821 |
|---|---|
| End of the center position in the TSS region: | 121207822 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000151495.7 BC069960 |
|---|---|
| Distance: | -119 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000151495.7:-119 BC069960:-119 FM204885:-130 FM204886:-130 NM_001146073:-179 uc007mvm.2:-183 uc033gcb.1:-183 |
TATA-Box annotation
| Distance to TSS: | 179 |
|---|---|
| Nearest PromoterID: | NM_001146073 |
| Entrez ID: | 238023 |
| Nearest Unigene: | Mm.275130 |
| Nearest Refseq: | NM_001001333 |
| Nearest Ensembl: | ENSMUSG00000039307 |
| Gene Name: | "hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing" |
| Gene Alias: | BC069960 |
| Gene Description: | "hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing" |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-89(GGACCTTAAAGG,-,0.00),-88(GACCTTAAAGGA,-,0.00)" |
