Personal tools

Difference between revisions of "TSS:Hg 106346.1"

From referenceTSS

Jump to: navigation, search
Line 11: Line 11:
 
|distance_to_tss=-19
 
|distance_to_tss=-19
 
|end=94762667
 
|end=94762667
 +
|end_of_center_position=94762662
 
|entrez_id=1557
 
|entrez_id=1557
 
|gc_percent=0.442786
 
|gc_percent=0.442786
|gene_alias=CPCJ|CYP2C|CYPIIC17|CYPIIC19|P450C2C|P450IIC19
+
|gene_alias=CPCJ
 
|gene_description=cytochrome P450 family 2 subfamily C member 19
 
|gene_description=cytochrome P450 family 2 subfamily C member 19
 
|gene_id=1557
 
|gene_id=1557
Line 29: Line 30:
 
|species=human
 
|species=human
 
|start=94762656
 
|start=94762656
 +
|start_of_center_position=94762661
 
|strand=+
 
|strand=+
 
|tata_box="-15(TGTTATAAAAAG,-,0.00)"
 
|tata_box="-15(TGTTATAAAAAG,-,0.00)"

Revision as of 07:05, 12 May 2019

Basic information about the TSS


TSS ID:hg_106346.1
Species:human
Chr:chr10
TSS Classification:yes
Start:94762656
End:94762667
Strand:+
TSS Score:1
Start of the center position in the TSS region:94762661
End of the center position in the TSS region:94762662



Gene and protein annotation


Transcript_name:ENST00000480405.2 NM_000769 uc057uzp.1
Distance:14
GeneID:1557
HGNC/MGI_ID:HGNC:2621
UniProt_ID:A0A087X125 P33261
Gene_name:cytochrome P450 family 2 subfamily C member 19
Gene_symbol:CYP2C19
Gene_synonyms:CPCJ P450IIC19
Gene_source:HGNC:2621



Transcript annotation


Transcript_name:ENST00000480405.2 NM_000769 uc057uzp.1
Distance:14
Num_trans:8
All_trans:ENST00000480405.2:14 NM_000769:14 uc057uzp.1:14 ENST00000371321.7:-33 uc010qnz.3:-33 M61854:34 AB463557:39 BC111846:39



TATA-Box annotation


Distance to TSS:-19
Nearest PromoterID:NM_000769
Entrez ID:1557
Nearest Unigene:Hs.282409
Nearest Refseq:NM_000769
Nearest Ensembl:ENSG00000165841
Gene Name:cytochrome P450 family 2 subfamily C member 19
Gene Alias:CPCJ
Gene Description:cytochrome P450 family 2 subfamily C member 19
Gene Type:protein-coding
CpG%:0.005
GC%:0.442786
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-15(TGTTATAAAAAG,-,0.00)"