Difference between revisions of "TSS:Hg 100061.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-11437 |entrez_id=158326 |gc_percent=0.467662 |gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 |gene_description=F...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C9orf143= | ||
| + | |C9orf145= | ||
| + | |C9orf154= | ||
| + | |MOTA= | ||
| + | |TILRR= | ||
| + | |TRIGNO2= | ||
| + | |all_trans=ENST00000397561.3:97 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=97 | ||
|distance_to_tss=-11437 | |distance_to_tss=-11437 | ||
| + | |end=14922434 | ||
|entrez_id=158326 | |entrez_id=158326 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 | |gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 | ||
|gene_description=FRAS1 related extracellular matrix 1 | |gene_description=FRAS1 related extracellular matrix 1 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=lactate dehydrogenase A pseudogene 4 | ||
| + | |gene_source=HGNC:6539 | ||
| + | |gene_symbol=LDHAP4 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6539 | ||
|nearest_ensembl=ENSG00000164946 | |nearest_ensembl=ENSG00000164946 | ||
|nearest_promoter_id=NM_144966 | |nearest_promoter_id=NM_144966 | ||
|nearest_refseq=NM_144966 | |nearest_refseq=NM_144966 | ||
|nearest_unigene=Hs.50850 | |nearest_unigene=Hs.50850 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=14922430 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000397561.3 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100061.1 | |tss_id=hg_100061.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:00, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000397561.3 |
|---|---|
| Distance: | 97 |
| Num_trans: | 1 |
| All_trans: | ENST00000397561.3:97 |
TATA-Box annotation
| Distance to TSS: | -11437 |
|---|---|
| Nearest PromoterID: | NM_144966 |
| Entrez ID: | 158326 |
| Nearest Unigene: | Hs.50850 |
| Nearest Refseq: | NM_144966 |
| Nearest Ensembl: | ENSG00000164946 |
| Gene Name: | lactate dehydrogenase A pseudogene 4 |
| Gene Alias: | BNAR |
| Gene Description: | FRAS1 related extracellular matrix 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
