Difference between revisions of "TSS:Mm 162569.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000182880.1:38 AK088880:38 ENSMUST00000085876.10:43 NM_001162938:43 uc007drs.1:43 uc007drt.1:43 AK041099:43 AK036671:274 |chr=chr1 |cpg_percent...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |E430029J22Rik= | ||
| + | |Pydc3= | ||
| + | |Pyr-rv1= | ||
|all_trans=ENSMUST00000182880.1:38 AK088880:38 ENSMUST00000085876.10:43 NM_001162938:43 uc007drs.1:43 uc007drt.1:43 AK041099:43 AK036671:274 | |all_trans=ENSMUST00000182880.1:38 AK088880:38 ENSMUST00000085876.10:43 NM_001162938:43 uc007drs.1:43 uc007drt.1:43 AK041099:43 AK036671:274 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-47 | |distance_to_tss=-47 | ||
|end=173673637 | |end=173673637 | ||
| + | |end_of_center_position=173673633 | ||
|entrez_id=100033459 | |entrez_id=100033459 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=9830148g24rik | + | |gene_alias=9830148g24rik |
|gene_description=interferon activated gene 208 | |gene_description=interferon activated gene 208 | ||
|gene_id=100033459 | |gene_id=100033459 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=173673628 | |start=173673628 | ||
| + | |start_of_center_position=173673632 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000182880.1 AK088880 | |transcript_name=ENSMUST00000182880.1 AK088880 | ||
Revision as of 05:42, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 173673632 |
|---|---|
| End of the center position in the TSS region: | 173673633 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000182880.1 AK088880 |
|---|---|
| Distance: | 38 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000182880.1:38 AK088880:38 ENSMUST00000085876.10:43 NM_001162938:43 uc007drs.1:43 uc007drt.1:43 AK041099:43 AK036671:274 |
TATA-Box annotation
| Distance to TSS: | -47 |
|---|---|
| Nearest PromoterID: | NM_001162938 |
| Entrez ID: | 100033459 |
| Nearest Unigene: | Mm.303377 |
| Nearest Refseq: | NM_001162938 |
| Nearest Ensembl: | ENSMUSG00000066677 |
| Gene Name: | pyrin domain containing 3 |
| Gene Alias: | 9830148g24rik |
| Gene Description: | interferon activated gene 208 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
