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Difference between revisions of "TSS:Mm 16426.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455 |chr=chr2 |cpg_percent=0.05 |distance=455 |distance_to_tss=-461 |end=180332402 |entre...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|OTTMUSG00000016300=
 
|all_trans=ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455
 
|all_trans=ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455
 
|chr=chr2
 
|chr=chr2
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|distance_to_tss=-461
 
|distance_to_tss=-461
 
|end=180332402
 
|end=180332402
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|end_of_center_position=180332397
 
|entrez_id=100036520
 
|entrez_id=100036520
 
|gc_percent=0.597015
 
|gc_percent=0.597015
|gene_alias=Gm14318|OTTMUSG00000016300
+
|gene_alias=Gm14318
 
|gene_description="GATA binding protein 5, opposite strand"
 
|gene_description="GATA binding protein 5, opposite strand"
 
|gene_id=100036520
 
|gene_id=100036520
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|species=mouse
 
|species=mouse
 
|start=180332390
 
|start=180332390
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|start_of_center_position=180332396
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000069943.3 NR_045877 uc029ujg.2 AK018689
 
|transcript_name=ENSMUST00000069943.3 NR_045877 uc029ujg.2 AK018689

Revision as of 12:18, 15 May 2019

Basic information about the TSS


TSS ID:mm_16426.1
Species:mouse
Chr:chr2
TSS Classification:no
Start:180332390
End:180332402
Strand:+
TSS Score:1
Start of the center position in the TSS region:180332396
End of the center position in the TSS region:180332397



Gene and protein annotation


Transcript_name:ENSMUST00000069943.3 NR_045877 uc029ujg.2 AK018689
Distance:455
GeneID:100036520
HGNC/MGI_ID:MGI:3650386
UniProt_ID:
Gene_name:"GATA binding protein 5, opposite strand"
Gene_symbol:Gata5os
Gene_synonyms:Gm14318
Gene_source:MGI:3650386



Transcript annotation


Transcript_name:ENSMUST00000069943.3 NR_045877 uc029ujg.2 AK018689
Distance:455
Num_trans:4
All_trans:ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455



TATA-Box annotation


Distance to TSS:-461
Nearest PromoterID:NR_045877
Entrez ID:100036520
Nearest Unigene:Mm.98950
Nearest Refseq:NR_045877
Nearest Ensembl:ENSMUSG00000056061
Gene Name:"GATA binding protein 5, opposite strand"
Gene Alias:Gm14318
Gene Description:"GATA binding protein 5, opposite strand"
Gene Type:ncRNA
CpG%:0.05
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):