Difference between revisions of "TSS:Mm 16426.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455 |chr=chr2 |cpg_percent=0.05 |distance=455 |distance_to_tss=-461 |end=180332402 |entre...") |
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{{TSSDetail | {{TSSDetail | ||
+ | |OTTMUSG00000016300= | ||
|all_trans=ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455 | |all_trans=ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455 | ||
|chr=chr2 | |chr=chr2 | ||
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|distance_to_tss=-461 | |distance_to_tss=-461 | ||
|end=180332402 | |end=180332402 | ||
+ | |end_of_center_position=180332397 | ||
|entrez_id=100036520 | |entrez_id=100036520 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
− | |gene_alias=Gm14318 | + | |gene_alias=Gm14318 |
|gene_description="GATA binding protein 5, opposite strand" | |gene_description="GATA binding protein 5, opposite strand" | ||
|gene_id=100036520 | |gene_id=100036520 | ||
Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=180332390 | |start=180332390 | ||
+ | |start_of_center_position=180332396 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000069943.3 NR_045877 uc029ujg.2 AK018689 | |transcript_name=ENSMUST00000069943.3 NR_045877 uc029ujg.2 AK018689 |
Revision as of 12:18, 15 May 2019
Basic information about the TSS
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Start of the center position in the TSS region: | 180332396 |
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End of the center position in the TSS region: | 180332397 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENSMUST00000069943.3 NR_045877 uc029ujg.2 AK018689 |
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Distance: | 455 |
Num_trans: | 4 |
All_trans: | ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455 |
TATA-Box annotation
Distance to TSS: | -461 |
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Nearest PromoterID: | NR_045877 |
Entrez ID: | 100036520 |
Nearest Unigene: | Mm.98950 |
Nearest Refseq: | NR_045877 |
Nearest Ensembl: | ENSMUSG00000056061 |
Gene Name: | "GATA binding protein 5, opposite strand" |
Gene Alias: | Gm14318 |
Gene Description: | "GATA binding protein 5, opposite strand" |
Gene Type: | ncRNA |
CpG%: | 0.05 |
GC%: | 0.597015 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |