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Difference between revisions of "TSS:Hg 106704.1"

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Line 10: Line 10:
 
|distance_to_tss=154
 
|distance_to_tss=154
 
|end=102395777
 
|end=102395777
 +
|end_of_center_position=102395751
 
|entrez_id=4791
 
|entrez_id=4791
 
|gc_percent=0.656716
 
|gc_percent=0.656716
|gene_alias=CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52
+
|gene_alias=CVID10
 
|gene_description=nuclear factor kappa B subunit 2
 
|gene_description=nuclear factor kappa B subunit 2
 
|gene_id=4791
 
|gene_id=4791
Line 31: Line 32:
 
|species=human
 
|species=human
 
|start=102395723
 
|start=102395723
 +
|start_of_center_position=102395750
 
|strand=+
 
|strand=+
 
|transcript_name=AK292654
 
|transcript_name=AK292654

Revision as of 08:07, 12 May 2019

Basic information about the TSS


TSS ID:hg_106704.1
Species:human
Chr:chr10
TSS Classification:yes
Start:102395723
End:102395777
Strand:+
TSS Score:1
Start of the center position in the TSS region:102395750
End of the center position in the TSS region:102395751



Gene and protein annotation


Transcript_name:AK292654
Distance:0
GeneID:4791
HGNC/MGI_ID:HGNC:7795
UniProt_ID:
Gene_name:nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Gene_symbol:NFKB2
Gene_synonyms:LYT-10 NF-kB2 p105 p49/p100 p52
Gene_source:HGNC:7795



Transcript annotation


Transcript_name:AK292654
Distance:0
Num_trans:16
All_trans:AK292654:0 ENST00000610498.1:-18 ENST00000467116.5:-18 ENST00000189444.10:-18 uc057vpn.1:-18 uc057vpo.1:-18 uc001kvd.6:-18 X61499:-18 X61498:-18 ENST00000471698.5:-31 uc057vpm.1:-31 NM_001261403:-128 NM_002502:-128 AB384801:182 U09609:183 BT009769:183



TATA-Box annotation


Distance to TSS:154
Nearest PromoterID:NM_001261403
Entrez ID:4791
Nearest Unigene:Hs.73090
Nearest Refseq:NM_002502
Nearest Ensembl:ENSG00000077150
Gene Name:nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Gene Alias:CVID10
Gene Description:nuclear factor kappa B subunit 2
Gene Type:protein-coding
CpG%:0.06
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):