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Difference between revisions of "TSS:Hg 106745.1"

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Line 7: Line 7:
 
|distance_to_tss=-309
 
|distance_to_tss=-309
 
|end=102644208
 
|end=102644208
 +
|end_of_center_position=102644187
 
|entrez_id=81603
 
|entrez_id=81603
 
|gc_percent=0.79602
 
|gc_percent=0.79602
|gene_alias=GERP|RNF27
+
|gene_alias=GERP
 
|gene_description=tripartite motif containing 8
 
|gene_description=tripartite motif containing 8
 
|gene_id=81603
 
|gene_id=81603
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=102644164
 
|start=102644164
 +
|start_of_center_position=102644186
 
|strand=+
 
|strand=+
 
|transcript_name=NM_030912
 
|transcript_name=NM_030912

Revision as of 08:13, 12 May 2019

Basic information about the TSS


TSS ID:hg_106745.1
Species:human
Chr:chr10
TSS Classification:yes
Start:102644164
End:102644208
Strand:+
TSS Score:1
Start of the center position in the TSS region:102644186
End of the center position in the TSS region:102644187



Gene and protein annotation


Transcript_name:NM_030912
Distance:287
GeneID:81603
HGNC/MGI_ID:HGNC:15579
UniProt_ID:Q9BZR9
Gene_name:tripartite motif containing 8
Gene_symbol:TRIM8
Gene_synonyms:GERP
Gene_source:HGNC:15579



Transcript annotation


Transcript_name:NM_030912
Distance:287
Num_trans:9
All_trans:NM_030912:287 ENST00000302424.11:288 uc001kvz.3:288 BC021925:288 AL360160:401 AF281046:401 DQ895209:408 DQ892019:408 AF220034:410



TATA-Box annotation


Distance to TSS:-309
Nearest PromoterID:NM_001345950
Entrez ID:81603
Nearest Unigene:Hs.336810
Nearest Refseq:NM_030912
Nearest Ensembl:ENSG00000171206
Gene Name:tripartite motif containing 8
Gene Alias:GERP
Gene Description:tripartite motif containing 8
Gene Type:protein-coding
CpG%:0.15
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):