Difference between revisions of "TSS:Mm 1807.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Jr6= | ||
| + | |Kiaa1486= | ||
|all_trans=ENSMUST00000068275.11:52 NM_172849:52 uc007brl.1:52 uc007brm.1:52 BC082310:52 ENSMUST00000123720.7:-53 uc007brk.1:-53 AK034747:-53 ENSMUST00000113494.8:59 AK137094:59 uc007brn.1:142 ENSMUST00000137862.7:-307 uc007brj.1:-307 AK049778:-307 ENSMUST00000123285.1:318 AK043512:318 | |all_trans=ENSMUST00000068275.11:52 NM_172849:52 uc007brl.1:52 uc007brm.1:52 BC082310:52 ENSMUST00000123720.7:-53 uc007brk.1:-53 AK034747:-53 ENSMUST00000113494.8:59 AK137094:59 uc007brn.1:142 ENSMUST00000137862.7:-307 uc007brj.1:-307 AK049778:-307 ENSMUST00000123285.1:318 AK043512:318 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-56 | |distance_to_tss=-56 | ||
|end=81077265 | |end=81077265 | ||
| + | |end_of_center_position=81077261 | ||
|entrez_id=241134 | |entrez_id=241134 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=9430031J16Rik | + | |gene_alias=9430031J16Rik |
|gene_description=neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 | |gene_description=neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 | ||
|gene_id=241134 | |gene_id=241134 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=81077256 | |start=81077256 | ||
| + | |start_of_center_position=81077260 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000068275.11 NM_172849 uc007brl.1 uc007brm.1 BC082310 | |transcript_name=ENSMUST00000068275.11 NM_172849 uc007brl.1 uc007brm.1 BC082310 | ||
Revision as of 20:53, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 81077260 |
|---|---|
| End of the center position in the TSS region: | 81077261 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000068275.11 NM_172849 uc007brl.1 uc007brm.1 BC082310 |
|---|---|
| Distance: | 52 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000068275.11:52 NM_172849:52 uc007brl.1:52 uc007brm.1:52 BC082310:52 ENSMUST00000123720.7:-53 uc007brk.1:-53 AK034747:-53 ENSMUST00000113494.8:59 AK137094:59 uc007brn.1:142 ENSMUST00000137862.7:-307 uc007brj.1:-307 AK049778:-307 ENSMUST00000123285.1:318 AK043512:318 |
TATA-Box annotation
| Distance to TSS: | -56 |
|---|---|
| Nearest PromoterID: | NM_172849 |
| Entrez ID: | 241134 |
| Nearest Unigene: | Mm.313904 |
| Nearest Refseq: | NM_172849 |
| Nearest Ensembl: | ENSMUSG00000054976 |
| Gene Name: | neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 |
| Gene Alias: | 9430031J16Rik |
| Gene Description: | neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
