Difference between revisions of "TSS:Mm 20145.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK088946:13 AK169029:14 ENSMUST00000056732.3:-19 NM_001081975:19 uc008lzg.1:19 AK018514:19 AK011317:22 |chr=chr2 |cpg_percent=0.055 |distance=13 |distan...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
|end=121474048 | |end=121474048 | ||
| + | |end_of_center_position=121474045 | ||
|entrez_id=100034361 | |entrez_id=100034361 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=121474041 | |start=121474041 | ||
| + | |start_of_center_position=121474044 | ||
|strand=- | |strand=- | ||
|tata_box="-72(CCCTTTAAGCGA,+,0.00)" | |tata_box="-72(CCCTTTAAGCGA,+,0.00)" | ||
Revision as of 07:48, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 121474044 |
|---|---|
| End of the center position in the TSS region: | 121474045 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK088946 |
|---|---|
| Distance: | 13 |
| Num_trans: | 7 |
| All_trans: | AK088946:13 AK169029:14 ENSMUST00000056732.3:-19 NM_001081975:19 uc008lzg.1:19 AK018514:19 AK011317:22 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001081975 |
| Entrez ID: | 100034361 |
| Nearest Unigene: | Mm.270393 |
| Nearest Refseq: | NM_001081975 |
| Nearest Ensembl: | ENSMUSG00000048222 |
| Gene Name: | microfibrillar-associated protein 1B |
| Gene Alias: | - |
| Gene Description: | microfibrillar-associated protein 1B |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-72(CCCTTTAAGCGA,+,0.00)" |
