Difference between revisions of "TSS:Hg 10281.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-144 |entrez_id=10747 |gc_percent=0.597015 |gene_alias=MAP19|MASP-2|MASP1P1|sMAP |gene_description=mannan binding lectin serine...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MASP-2= | ||
| + | |MASP1P1= | ||
| + | |all_trans=NM_006610:132 NM_139208:132 AK290823:132 ENST00000400898.3:138 uc001arv.4:138 AB008047:138 ENST00000480221.1:144 uc057cfb.1:144 BC052299:144 BC067359:144 BC080556:144 Y18281:144 Y18284:144 ENST00000400897.7:148 uc001aru.4:148 Y09926:148 X98400:148 Y18283:149 BC156886:246 BC156086:246 Y18282:277 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=132 | ||
|distance_to_tss=-144 | |distance_to_tss=-144 | ||
| + | |end=11047395 | ||
|entrez_id=10747 | |entrez_id=10747 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=MAP19|MASP-2|MASP1P1|sMAP | |gene_alias=MAP19|MASP-2|MASP1P1|sMAP | ||
|gene_description=mannan binding lectin serine peptidase 2 | |gene_description=mannan binding lectin serine peptidase 2 | ||
| − | |gene_name=MASP2 | + | |gene_id=10747 |
| + | |gene_name=mannan binding lectin serine peptidase 2 | ||
| + | |gene_source=HGNC:6902 | ||
| + | |gene_symbol=MASP2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6902 | ||
|nearest_ensembl=ENSG00000009724 | |nearest_ensembl=ENSG00000009724 | ||
|nearest_promoter_id=NM_139208 | |nearest_promoter_id=NM_139208 | ||
|nearest_refseq=NM_006610 | |nearest_refseq=NM_006610 | ||
|nearest_unigene=Hs.655645 | |nearest_unigene=Hs.655645 | ||
| + | |num_trans=21 | ||
| + | |sMAP= | ||
| + | |species=human | ||
| + | |start=11047370 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_006610 NM_139208 AK290823 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10281.1 | |tss_id=hg_10281.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O00187 | ||
}} | }} | ||
Revision as of 19:42, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_006610 NM_139208 AK290823 |
|---|---|
| Distance: | 132 |
| Num_trans: | 21 |
| All_trans: | NM_006610:132 NM_139208:132 AK290823:132 ENST00000400898.3:138 uc001arv.4:138 AB008047:138 ENST00000480221.1:144 uc057cfb.1:144 BC052299:144 BC067359:144 BC080556:144 Y18281:144 Y18284:144 ENST00000400897.7:148 uc001aru.4:148 Y09926:148 X98400:148 Y18283:149 BC156886:246 BC156086:246 Y18282:277 |
TATA-Box annotation
| Distance to TSS: | -144 |
|---|---|
| Nearest PromoterID: | NM_139208 |
| Entrez ID: | 10747 |
| Nearest Unigene: | Hs.655645 |
| Nearest Refseq: | NM_006610 |
| Nearest Ensembl: | ENSG00000009724 |
| Gene Name: | mannan binding lectin serine peptidase 2 |
| Gene Alias: | MAP19 |
| Gene Description: | mannan binding lectin serine peptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
