Difference between revisions of "TSS:Hg 100083.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=-58 |entrez_id=11168 |gc_percent=0.776119 |gene_alias=DFS70|LEDGF|PAIP|PSIP2|p52|p75 |gene_description=PC4 and SFRS1 interacting...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LEDGF= | ||
| + | |PAIP= | ||
| + | |PSIP2= | ||
| + | |all_trans=ENST00000397519.6:29 ENST00000487363.5:29 NM_021144:29 uc064sfg.1:29 uc064sfj.1:29 AF098482:66 AF098483:106 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=29 | ||
|distance_to_tss=-58 | |distance_to_tss=-58 | ||
| + | |end=15510376 | ||
|entrez_id=11168 | |entrez_id=11168 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=DFS70|LEDGF|PAIP|PSIP2|p52|p75 | |gene_alias=DFS70|LEDGF|PAIP|PSIP2|p52|p75 | ||
|gene_description=PC4 and SFRS1 interacting protein 1 | |gene_description=PC4 and SFRS1 interacting protein 1 | ||
| − | |gene_name=PSIP1 | + | |gene_id=11168 |
| + | |gene_name=PC4 and SFRS1 interacting protein 1 | ||
| + | |gene_source=HGNC:9527 | ||
| + | |gene_symbol=PSIP1 | ||
| + | |gene_synonyms=LEDGF p52 p75 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9527 | ||
|nearest_ensembl=ENSG00000164985 | |nearest_ensembl=ENSG00000164985 | ||
|nearest_promoter_id=NM_021144 | |nearest_promoter_id=NM_021144 | ||
|nearest_refseq=NM_021144 | |nearest_refseq=NM_021144 | ||
|nearest_unigene=Hs.658434 | |nearest_unigene=Hs.658434 | ||
| + | |num_trans=7 | ||
| + | |p52= | ||
| + | |p75= | ||
| + | |species=human | ||
| + | |start=15510317 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000397519.6 ENST00000487363.5 NM_021144 uc064sfg.1 uc064sfj.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100083.1 | |tss_id=hg_100083.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O75475 | ||
}} | }} | ||
Revision as of 17:01, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000397519.6 ENST00000487363.5 NM_021144 uc064sfg.1 uc064sfj.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | 7 |
| All_trans: | ENST00000397519.6:29 ENST00000487363.5:29 NM_021144:29 uc064sfg.1:29 uc064sfj.1:29 AF098482:66 AF098483:106 |
TATA-Box annotation
| Distance to TSS: | -58 |
|---|---|
| Nearest PromoterID: | NM_021144 |
| Entrez ID: | 11168 |
| Nearest Unigene: | Hs.658434 |
| Nearest Refseq: | NM_021144 |
| Nearest Ensembl: | ENSG00000164985 |
| Gene Name: | PC4 and SFRS1 interacting protein 1 |
| Gene Alias: | DFS70 |
| Gene Description: | PC4 and SFRS1 interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
