Difference between revisions of "TSS:Hg 102945.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=-15 |entrez_id=5900 |gc_percent=0.845771 |gene_alias=RGDS|RGF|RalGEF |gene_description=ral guanine nucleotide dissociation stim...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |RGF= | ||
| + | |RalGEF= | ||
| + | |all_trans=NM_006266:6 NM_001271776:6 BC059362:17 ENST00000372050.7:80 ENST00000372047.7:80 uc004ccq.5:80 uc004cco.5:80 AF295773:91 ENST00000493438.5:100 uc004ccp.5:100 AK074114:100 GQ129266:100 GQ129265:100 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=6 | ||
|distance_to_tss=-15 | |distance_to_tss=-15 | ||
| + | |end=133121275 | ||
|entrez_id=5900 | |entrez_id=5900 | ||
|gc_percent=0.845771 | |gc_percent=0.845771 | ||
|gene_alias=RGDS|RGF|RalGEF | |gene_alias=RGDS|RGF|RalGEF | ||
|gene_description=ral guanine nucleotide dissociation stimulator | |gene_description=ral guanine nucleotide dissociation stimulator | ||
| − | |gene_name=RALGDS | + | |gene_id=5900 |
| + | |gene_name=ral guanine nucleotide dissociation stimulator | ||
| + | |gene_source=HGNC:9842 | ||
| + | |gene_symbol=RALGDS | ||
| + | |gene_synonyms=RGDS RGF RalGEF | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9842 | ||
|nearest_ensembl=ENSG00000160271 | |nearest_ensembl=ENSG00000160271 | ||
|nearest_promoter_id=NM_001271776 | |nearest_promoter_id=NM_001271776 | ||
|nearest_refseq=NM_006266 | |nearest_refseq=NM_006266 | ||
|nearest_unigene=Hs.106185 | |nearest_unigene=Hs.106185 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=133121255 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_006266 NM_001271776 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102945.1 | |tss_id=hg_102945.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N4Y1 | ||
}} | }} | ||
Revision as of 19:48, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_006266 NM_001271776 |
|---|---|
| Distance: | 6 |
| Num_trans: | 13 |
| All_trans: | NM_006266:6 NM_001271776:6 BC059362:17 ENST00000372050.7:80 ENST00000372047.7:80 uc004ccq.5:80 uc004cco.5:80 AF295773:91 ENST00000493438.5:100 uc004ccp.5:100 AK074114:100 GQ129266:100 GQ129265:100 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_001271776 |
| Entrez ID: | 5900 |
| Nearest Unigene: | Hs.106185 |
| Nearest Refseq: | NM_006266 |
| Nearest Ensembl: | ENSG00000160271 |
| Gene Name: | ral guanine nucleotide dissociation stimulator |
| Gene Alias: | RGDS |
| Gene Description: | ral guanine nucleotide dissociation stimulator |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.845771 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
