Difference between revisions of "TSS:Hg 109521.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=303 | |distance_to_tss=303 | ||
|end=60389686 | |end=60389686 | ||
| + | |end_of_center_position=60389681 | ||
|entrez_id=288 | |entrez_id=288 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=ANKYRIN-G | + | |gene_alias=ANKYRIN-G |
|gene_description=ankyrin 3 | |gene_description=ankyrin 3 | ||
|gene_id=288 | |gene_id=288 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=60389675 | |start=60389675 | ||
| + | |start_of_center_position=60389680 | ||
|strand=- | |strand=- | ||
|tata_box="-34(GGTTTTTAAAAG,-,0.00),-33(GTTTTTAAAAGC,+,0.00),-33(GTTTTTAAAAGC,-,0.00)" | |tata_box="-34(GGTTTTTAAAAG,-,0.00),-33(GTTTTTAAAAGC,+,0.00),-33(GTTTTTAAAAGC,-,0.00)" | ||
Revision as of 03:46, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 60389680 |
|---|---|
| End of the center position in the TSS region: | 60389681 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000280772.6 uc001jky.4 U13616 |
|---|---|
| Distance: | -44 |
| Num_trans: | 4 |
| All_trans: | ENST00000280772.6:-44 uc001jky.4:-44 U13616:-44 NM_020987:-190 |
TATA-Box annotation
| Distance to TSS: | 303 |
|---|---|
| Nearest PromoterID: | NM_020987 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | "ankyrin 3, node of Ranvier (ankyrin G)" |
| Gene Alias: | ANKYRIN-G |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GGTTTTTAAAAG,-,0.00),-33(GTTTTTAAAAGC,+,0.00),-33(GTTTTTAAAAGC,-,0.00)" |
